RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ASCC3Q8N3C0 2202 aaKnown RBP12.75□□□□□ -0.37
RNF4-216ENST00000511859 NUP205Q92621 2012 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 EML5Q05BV3 1969 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 FLNBO75369 2602 aaKnown RBP12.75□□□□□ -0.37
RNF4-216ENST00000511859 SPECC1L-ADORA2AF8WAN1 911 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 H7C4K7 107 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 MOSPD3O75425 235 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 LYPLA2O95372 231 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 CTHP32929 405 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 MPLP40238 635 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 CD300LGQ6UXG3 332 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 HAS1Q92839 578 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 CXCL16Q9H2A7 254 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 ASAH2Q9NR71 780 aa12.75□□□□□ -0.37
RNF4-216ENST00000511859 LRRIQ4A6NIV6 560 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 SYN3O14994 580 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 ATG13O75143 517 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 SEC24AO95486 1093 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 MYL4P12829 197 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 CEACAM1P13688 526 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 IGFBP6P24592 240 aaPredicted RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 ARPP19P56211 112 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 RING1Q06587 406 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 NOSTRINQ8IVI9 506 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 GATA6Q92908 595 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 CCDC43Q96MW1 224 aaKnown RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 PPP1R10Q96QC0 940 aaKnown RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 NAP1L4Q99733 375 aaKnown RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
RNF4-216ENST00000511859 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 SLITRK6Q9H5Y7 841 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 CEP72Q9P209 647 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
RNF4-216ENST00000511859 C4orf47A7E2U8 309 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 GIPC1O14908 333 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 CCNT1O60563 726 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNF4-216ENST00000511859 BRCC3P46736 316 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 SOX9P48436 509 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 RARRES1P49788 294 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 SSRP1Q08945 709 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 PRPF4BQ13523 1007 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 PON2Q15165 354 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 TEAD2Q15562 447 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 MAPK6Q16659 721 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 SH3PXD2AQ5TCZ1 1133 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 EIF2AK1Q9BQI3 630 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 EDEM2Q9BV94 578 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 SCNM1Q9BWG6 230 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 AFF4Q9UHB7 1163 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 SLC8A2Q9UPR5 921 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 GCN1Q92616 2671 aaKnown RBP12.73□□□□□ -0.37
RNF4-216ENST00000511859 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
RNF4-216ENST00000511859 KIF26AQ9ULI4 1882 aaPredicted RBP12.72□□□□□ -0.37
RNF4-216ENST00000511859 CCDC194A0A1B0GVG4 234 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 I3L4J1 428 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 ACKR2O00590 384 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 EXTL3O43909 919 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 RHOBTB1O94844 696 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 DEXIO95424 95 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 GJA1P17302 382 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 CSRP1P21291 193 aaKnown RBP12.72□□□□□ -0.37
RNF4-216ENST00000511859 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 TWF1Q12792 350 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 PTPAQ15257 358 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 NPY5RQ15761 445 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 DCAF4L1Q3SXM0 396 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 PLK5Q496M5 336 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 C3orf58Q8NDZ4 430 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 FBXL5Q9UKA1 691 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 FREM2Q5SZK8 3169 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 PI4KAP42356 2102 aa12.72□□□□□ -0.37
RNF4-216ENST00000511859 NCANO14594 1321 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms