RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ELF1P32519 619 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 COL9A2Q14055 689 aaPredicted RBP20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 MRPL58Q14197 206 aaKnown RBP20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 GPIHBP1Q8IV16 184 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 MFSD6LQ8IWD5 586 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 SHKBP1Q8TBC3 707 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 CCDC43Q96MW1 224 aaKnown RBP20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 LRRC3BQ96PB8 259 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 TTC12Q9H892 705 aaPredicted RBP20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 FBXL5Q9UKA1 691 aa20.93■□□□□ 0.94
HMGCS1-206ENST00000511774 SMIM28A0A1B0GU29 152 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 ZNF263O14978 683 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 AXIN1O15169 862 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 LIMK1P53667 647 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 EPHA5P54756 1037 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 SCRN1Q12765 414 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 TEAD2Q15562 447 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 MAPK6Q16659 721 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 TMEM132AQ24JP5 1023 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 IL31Q6EBC2 164 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 TMEM130Q8N3G9 435 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 DEPDC1BQ8WUY9 529 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 ZMAT2Q96NC0 199 aaKnown RBP20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 NAP1L4Q99733 375 aaKnown RBP20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 ARRDC1-AS1Q9H2J1 176 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 SMOC1Q9H4F8 434 aa20.92■□□□□ 0.94
HMGCS1-206ENST00000511774 CITO14578 2027 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 MEFVO15553 781 aaPredicted RBP20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 MED24O75448 989 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 VNN2O95498 520 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 MYL4P12829 197 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 ATP2B1P20020 1258 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 CNR2P34972 360 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 TXKP42681 527 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 TWF1Q12792 350 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 CALCRLQ16602 461 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 AASDHQ4L235 1098 aaPredicted RBP20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 PKN3Q6P5Z2 889 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 ALKAL1Q6UXT8 129 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 MCPH1Q8NEM0 835 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 TTC8Q8TAM2 541 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 UROC1Q96N76 676 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 MTMR9Q96QG7 549 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 ADPGKQ9BRR6 497 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 LRRC3Q9BY71 257 aa20.91■□□□□ 0.94
HMGCS1-206ENST00000511774 DSPP15924 2871 aaKnown RBP20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 TRAPPC3O43617 180 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 CTDNEP1O95476 244 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 XRCC6P12956 609 aaKnown RBP eCLIP20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 DCAF4L1Q3SXM0 396 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 XKR4Q5GH76 650 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 STXBP5Q5T5C0 1151 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 CYP4A22Q5TCH4 519 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 CEP68Q76N32 757 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 WDR5BQ86VZ2 330 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 CATSPER3Q86XQ3 398 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 DDX1Q92499 740 aaKnown RBP20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 C2orf40Q9H1Z8 148 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 TMEM60Q9H2L4 133 aa20.9■□□□□ 0.94
HMGCS1-206ENST00000511774 PODXLO00592 558 aa20.89■□□□□ 0.93
HMGCS1-206ENST00000511774 PXNP49023 591 aaPredicted RBP20.89■□□□□ 0.93
HMGCS1-206ENST00000511774 MLLT6P55198 1093 aaPredicted RBP20.89■□□□□ 0.93
HMGCS1-206ENST00000511774 ATF7IP2Q5U623 682 aa20.89■□□□□ 0.93
HMGCS1-206ENST00000511774 ZFYVE19Q96K21 471 aa20.89■□□□□ 0.93
HMGCS1-206ENST00000511774 NUP210Q8TEM1 1887 aaPredicted RBP20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 STK36Q9NRP7 1315 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 MYBPHLA2RUH7 354 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 SPECC1L-ADORA2AF8WAN1 911 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 EXTL3O43909 919 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 PROS1P07225 676 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 ZNF806P0C7X5 589 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 CTHP32929 405 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 NAMPTP43490 491 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 FCHO2Q0JRZ9 810 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 LRRC32Q14392 662 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 CTXN3Q4LDR2 81 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 STPG1Q5TH74 334 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 TPGS2Q68CL5 300 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 CPLX2Q6PUV4 134 aaKnown RBP20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 RNF19BQ6ZMZ0 732 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 KBTBD6Q86V97 674 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 TMC8Q8IU68 726 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 DEPTORQ8TB45 409 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 C18orf25Q96B23 403 aaPredicted RBP20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 MKNK1Q9BUB5 465 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 DNAJC25Q9H1X3 360 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 CRISPLD1Q9H336 500 aa20.88■□□□□ 0.93
HMGCS1-206ENST00000511774 C1QTNF9BB2RNN3 333 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 SYN3O14994 580 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 CHADO15335 359 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 KCNK5O95279 499 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 C1QTNF9P0C862 333 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 CYP11B2P19099 503 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 HOXA6P31267 233 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 RAP1GAPP47736 663 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 KPNA1P52294 538 aaPredicted RBP20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 OSTNP61366 133 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 CCINQ13939 588 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 PON2Q15165 354 aa20.87■□□□□ 0.93
HMGCS1-206ENST00000511774 PADI6Q6TGC4 694 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms