RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 NFIBO00712 420 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 SMIM24O75264 130 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 TRPA1O75762 1119 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 RGS2P41220 211 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 DEUP1Q05D60 604 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 SMTNL2Q2TAL5 461 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 RASGRP2Q7LDG7 609 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 PLEKHH3Q7Z736 793 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 ATPAF2Q8N5M1 289 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 TC2NQ8N9U0 490 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 GMCL1P1Q8NEA9 526 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 AGR3Q8TD06 166 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 TGS1Q96RS0 853 aaKnown RBP9.54□□□□□ -0.88
NEK1-207ENST00000511633 DYRK4Q9NR20 520 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.54□□□□□ -0.88
NEK1-207ENST00000511633 PCDHB2Q9Y5E7 798 aa9.54□□□□□ -0.88
NEK1-207ENST00000511633 DIAPH2O60879 1101 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 APRTP07741 180 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 MAP2P11137 1827 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 MAP2K2P36507 400 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 CLCN3P51790 818 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ORC1Q13415 861 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PDE1CQ14123 709 aaPredicted RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 PIGHQ14442 188 aaPredicted RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 NWD1Q149M9 1564 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ZBTB41Q5SVQ8 909 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 RNF180Q86T96 592 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PABPC5Q96DU9 382 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 TMX2Q9Y320 296 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 RBBP7Q16576 425 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 DCAF6Q58WW2 860 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 CYTH2Q99418 400 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 EHD4Q9H223 541 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ALG13Q9NP73 1137 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 METTL5Q9NRN9 209 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 KRT82Q9NSB4 513 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 SLC13A4Q9UKG4 626 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PRG3Q9Y2Y8 225 aaPredicted RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 PHF2O75151 1096 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PPFIA2O75334 1257 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 COMTP21964 271 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 SNRPFP62306 86 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 PTPAQ15257 358 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 TRMT10CQ7L0Y3 403 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 NUDCD3Q8IVD9 361 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 OPTNQ96CV9 577 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 GMCL1Q96IK5 515 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 LBHD1Q9BQE6 289 aaPredicted RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 SMYD3Q9H7B4 428 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ZFATQ9P243 1243 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ZFP69BQ9UJL9 534 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 GOLGA8RI6L899 631 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 C2CD2LO14523 706 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 SREBF1P36956 1147 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 SEC23AQ15436 765 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 IL31Q6EBC2 164 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 PBXIP1Q96AQ6 731 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
NEK1-207ENST00000511633 DPP3Q9NY33 737 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 ADAM21Q9UKJ8 722 aa9.53□□□□□ -0.88
NEK1-207ENST00000511633 TCRBV5S4A2TA0A5A2 114 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 RGL2O15211 777 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 ANP32DO95626 131 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 VTNP04004 478 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 KCNA1Q09470 495 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 FSCBQ5H9T9 825 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 LCA5Q86VQ0 697 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 DCP1BQ8IZD4 617 aaKnown RBP9.52□□□□□ -0.88
NEK1-207ENST00000511633 ASAP3Q8TDY4 903 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 SH3KBP1Q96B97 665 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 GLT1D1Q96MS3 346 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 DRC3Q9H069 523 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 MUC3BQ9H195 1237 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 ACTR5Q9H9F9 607 aaPredicted RBP9.52□□□□□ -0.88
NEK1-207ENST00000511633 PXMP2Q9NR77 195 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 RAB6BQ9NRW1 208 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 CPA4Q9UI42 421 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 TFR2Q9UP52 801 aa9.52□□□□□ -0.88
NEK1-207ENST00000511633 COL5A2P05997 1499 aaPredicted RBP9.52□□□□□ -0.88
NEK1-207ENST00000511633 C3orf70A6NLC5 250 aaPredicted RBP9.52□□□□□ -0.89
NEK1-207ENST00000511633 TFRCP02786 760 aaKnown RBP9.52□□□□□ -0.89
NEK1-207ENST00000511633 SUPT20HL2P0C7V6 817 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 PCSK1P29120 753 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 CYP2C19P33261 490 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 CASP4P49662 377 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 TOB1P50616 345 aaPredicted RBP9.52□□□□□ -0.89
NEK1-207ENST00000511633 VSNL1P62760 191 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 PHEXP78562 749 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.89
NEK1-207ENST00000511633 GOLPH3Q9H4A6 298 aa9.52□□□□□ -0.89
NEK1-207ENST00000511633 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms