RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 GADL1Q6ZQY3 521 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 FITM2Q8N6M3 262 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 TBC1D15Q8TC07 691 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 HDAC10Q969S8 669 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 LRGUKQ96M69 825 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 GSTO2Q9H4Y5 243 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 GALNT9Q9HCQ5 603 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 CASS4Q9NQ75 786 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 KLHL11Q9NVR0 708 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 TBCCD1Q9NVR7 557 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 CCDC194A0A1B0GVG4 234 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 VSTM5A8MXK1 200 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 PRC1O43663 620 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 SPDEFO95238 335 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 CFIP05156 583 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 CKBP12277 381 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 FDXRP22570 491 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 SLC6A2P23975 617 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 ZFP36P26651 326 aaKnown RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 GUCY1A2P33402 732 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 NANOS3P60323 173 aaKnown RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 KIF23Q02241 960 aaPredicted RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 ZNF267Q14586 743 aaPredicted RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 SEPT2Q15019 361 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 OTUD7BQ6GQQ9 843 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 PPP4R3AQ6IN85 833 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 CXorf57Q6NSI4 855 aaKnown RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 B3GNT9Q6UX72 402 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 Q6YL49 198 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 CATIPQ7Z7H3 387 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 COLGALT2Q8IYK4 626 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 FAM43AQ8N2R8 423 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 SLC44A3Q8N4M1 653 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 AOPEPQ8N6M6 819 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 NLGN4YQ8NFZ3 816 aaPredicted RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 GPR150Q8NGU9 434 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 TMX3Q96JJ7 454 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 MYOCQ99972 504 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 C11orf54Q9H0W9 315 aaPredicted RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 SLC12A5Q9H2X9 1139 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 TOR3AQ9H497 397 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 DDX20Q9UHI6 824 aaKnown RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 PNMA8BQ9ULN7 279 aaPredicted RBP4.12□□□□□ -1.75
CHD1-207ENST00000511628 DMTF1Q9Y222 760 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 PNPLA7Q6ZV29 1317 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 ATRNL1Q5VV63 1379 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 AATKQ6ZMQ8 1374 aa4.12□□□□□ -1.75
CHD1-207ENST00000511628 PIPSLA2A3N6 862 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 CDHR4A6H8M9 788 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 MTHFD1P11586 935 aaKnown RBP4.11□□□□□ -1.75
CHD1-207ENST00000511628 FGFR4P22455 802 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 PCSK1P29120 753 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 CXCR5P32302 372 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 CXADRP78310 365 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 MPP3Q13368 585 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 GALEQ14376 348 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 UAP1L1Q3KQV9 507 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 MAP9Q49MG5 647 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 Q6ZPA2 131 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 SEM1Q6ZVN7 128 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 CCDC146Q8IYE0 955 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 HOXB13Q92826 284 aaPredicted RBP4.11□□□□□ -1.75
CHD1-207ENST00000511628 RAB24Q969Q5 203 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 TIFAQ96CG3 184 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 PNKPQ96T60 521 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 NEU1Q99519 415 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 PACSIN1Q9BY11 444 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 GTPBP4Q9BZE4 634 aaKnown RBP4.11□□□□□ -1.75
CHD1-207ENST00000511628 MAN1C1Q9NR34 630 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 FBXO34Q9NWN3 711 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 OBP2AQ9NY56 170 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 USP25Q9UHP3 1055 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 PCDHA13Q9Y5I0 950 aa4.11□□□□□ -1.75
CHD1-207ENST00000511628 GRID2IPA4D2P6 1211 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 ZAR1LA6NP61 321 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 KIF3BO15066 747 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 MYBP10242 640 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 GCSHP23434 173 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 EDNRBP24530 442 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 CYP2C19P33261 490 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 SLC6A9P48067 706 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 ADKP55263 362 aaKnown RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 OCA2Q04671 838 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 MTM1Q13496 603 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 GRM3Q14832 879 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 DPY19L2P1Q6NXN4 242 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 OR2I1PQ8NGU4 316 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 NUP133Q8WUM0 1156 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 ASB10Q8WXI3 467 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 COA7Q96BR5 231 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 RUNDC1Q96C34 613 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 PTCD3Q96EY7 689 aaKnown RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 MARS2Q96GW9 593 aaKnown RBP4.1□□□□□ -1.75
CHD1-207ENST00000511628 COQ10AQ96MF6 247 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 AIFM3Q96NN9 605 aa4.1□□□□□ -1.75
CHD1-207ENST00000511628 NUP88Q99567 741 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms