RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 PYM1Q9BRP8 204 aaKnown RBP12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 TMEM206Q9H813 350 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 USTQ9Y2C2 406 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 DERAQ9Y315 318 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 M0QZQ0 153 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 GPR37L1O60883 481 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 SLFN14P0C7P3 912 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 PFKFB1P16118 471 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 MCM4P33991 863 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 AFMP43652 599 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 CUL4BQ13620 913 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 TMEM132DQ14C87 1099 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 BEST2Q8NFU1 509 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 ZNF507Q8TCN5 953 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 PCDHB8Q9UN66 801 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
SH3RF1-205ENST00000511421 MTCL1Q9Y4B5 1905 aaKnown RBP12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 PIRO00625 290 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 EIF3DO15371 548 aaKnown RBP eCLIP12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 WNT7BP56706 349 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 CCDC149Q6ZUS6 474 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 EFCAB13Q8IY85 973 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 GRAMD1CQ8IYS0 662 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 SMG7Q92540 1137 aaKnown RBP12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 SAAL1Q96ER3 474 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 PAGE5Q96GU1 130 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 FAM213AQ9BRX8 229 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 LRFN3Q9BTN0 628 aa12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 WDR6Q9NNW5 1121 aaKnown RBP12.6□□□□□ -0.39
SH3RF1-205ENST00000511421 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 H7C4K7 107 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 KLRC4O43908 158 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 ABLIM3O94929 683 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 LDHAP00338 332 aaKnown RBP12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 C8AP07357 584 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 LILRA4P59901 499 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 ROR1Q01973 937 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 ZDHHC14Q8IZN3 488 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 APPL2Q8NEU8 664 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 PCIF1Q9H4Z3 704 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 FBXL5Q9UKA1 691 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 C2orf16Q68DN1 1984 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 TECTAO75443 2155 aa12.59□□□□□ -0.39
SH3RF1-205ENST00000511421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 WDR27A2RRH5 827 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 SPTLC1O15269 473 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 TGFB1I1O43294 461 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 EXTL3O43909 919 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 N4BP1O75113 896 aaKnown RBP12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 OAZ2O95190 189 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 IL18RAPO95256 599 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 HNRNPA1P09651 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 HOXA9P31269 272 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 CTXN3Q4LDR2 81 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 ARMCX5Q6P1M9 558 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 TDRD5Q8NAT2 981 aaKnown RBP12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 ZNF461Q8TAF7 563 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 EDAQ92838 391 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 DPP3Q9NY33 737 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 USP25Q9UHP3 1055 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 TIMM13Q9Y5L4 95 aaPredicted RBP12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 TCHHQ07283 1943 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 ANK1P16157 1881 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 CLUHO75153 1309 aa12.58□□□□□ -0.4
SH3RF1-205ENST00000511421 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
SH3RF1-205ENST00000511421 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms