RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 FANCLQ9NW38 375 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 TMEM161AQ9NX61 479 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 CPSF3Q9UKF6 684 aaKnown RBP5.86□□□□□ -1.47
PROM1-211ENST00000511153 FRMD4BQ9Y2L6 1034 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 NFE2L3Q9Y4A8 694 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 SQORQ9Y6N5 450 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 COL4A6Q14031 1691 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 UBE4BO95155 1302 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 SCN1AP35498 2009 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 CHD7Q9P2D1 2997 aa5.86□□□□□ -1.47
PROM1-211ENST00000511153 SMIM28A0A1B0GU29 152 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 BICDL2A1A5D9 508 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 EPOPA6NHQ4 379 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 LRRIQ3A6PVS8 624 aaPredicted RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 PDXKO00764 312 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 C2CD2LO14523 706 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 PHACTR2O75167 634 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 BAIAP3O94812 1187 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 GJB5O95377 273 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 ITGB1P05556 798 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 EPB41P11171 864 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 ATP1A3P13637 1013 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 TNNI1P19237 187 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 GARTP22102 1010 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 CTNNB1P35222 781 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 BRCC3P46736 316 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 SLC11A1P49279 550 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 ZNF165P49910 485 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 SKOR1P84550 965 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 APBA1Q02410 837 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 PPP2R3AQ06190 1150 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 LRMPQ12912 555 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 BIRC3Q13489 604 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 TMEM132DQ14C87 1099 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 C4orf48Q5BLP8 95 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 SPOPLQ6IQ16 392 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 SCARA5Q6ZMJ2 495 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 Q7L0L9 218 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 MRPL10Q7Z7H8 261 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 BRSK2Q8IWQ3 736 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 DHX40Q8IX18 779 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 SLC17A8Q8NDX2 589 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 GSTCDQ8NEC7 633 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 URGCPQ8TCY9 931 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 ADAMTS19Q8TE59 1207 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 GDPD5Q8WTR4 605 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 AUTS2Q8WXX7 1259 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 CCDC51Q96ER9 411 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 CNOT6LQ96LI5 555 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 CRACR2AQ9BSW2 395 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 VPS16Q9H269 839 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 MTIF3Q9H2K0 278 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 NRDE2Q9H7Z3 1164 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 ALG13Q9NP73 1137 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 DMAC2Q9NW81 257 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 KCNG1Q9UIX4 513 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 RWDD2AQ9UIY3 292 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 PDCD11Q14690 1871 aaKnown RBP5.85□□□□□ -1.47
PROM1-211ENST00000511153 SZT2Q5T011 3432 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 NLRC5Q86WI3 1866 aa5.85□□□□□ -1.47
PROM1-211ENST00000511153 TTC26A0AVF1 554 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 LINC01553A4QN01 128 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 BECN2A8MW95 431 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 KCNJ18B7U540 433 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 HCRTO43612 131 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 KIF20AO95235 890 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 ITGB3P05106 788 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 THP07101 528 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 TMEM191BP0C7N4 346 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 SKIP12755 728 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 POLR2BP30876 1174 aaKnown RBP5.84□□□□□ -1.47
PROM1-211ENST00000511153 PSMC2P35998 433 aaKnown RBP5.84□□□□□ -1.47
PROM1-211ENST00000511153 KLK7P49862 253 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 RAB27AP51159 221 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 CLCNKBP51801 687 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 VAMP7P51809 220 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 FKBP3Q00688 224 aaKnown RBP5.84□□□□□ -1.47
PROM1-211ENST00000511153 PPP3CAQ08209 521 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 BFSP1Q12934 665 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 KCNJ12Q14500 433 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 C1orf220Q5T0J3 134 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 TMCO4Q5TGY1 634 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 RASIP1Q5U651 963 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 LRSAM1Q6UWE0 723 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 TAS1R1Q7RTX1 841 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 CEP57Q86XR8 500 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 IRF2BP1Q8IU81 584 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 GLYCTKQ8IVS8 523 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 HACE1Q8IYU2 909 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 CRIPAKQ8N1N5 446 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 MICALL1Q8N3F8 863 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 FIBCD1Q8N539 461 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 C3orf58Q8NDZ4 430 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 FNBP1Q96RU3 617 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 SLC9A7Q96T83 725 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 TMEM117Q9H0C3 514 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 RBSNQ9H1K0 784 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 CWH43Q9H720 699 aa5.84□□□□□ -1.47
PROM1-211ENST00000511153 MAGEC2Q9UBF1 373 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms