RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMC5Q6UXY8 1006 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 CBWD2Q8IUF1 395 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 BRSK2Q8IWQ3 736 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 CLSTN3Q9BQT9 956 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 ASB7Q9H672 318 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 DZANK1Q9NVP4 752 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 DERAQ9Y315 318 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 TGM5O43548 720 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 LDHAP00338 332 aaKnown RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 MYL1P05976 194 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 SSTR3P32745 418 aaPredicted RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 CREMQ03060 361 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 PSMD2Q13200 908 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 PNOCQ13519 176 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 SNW1Q13573 536 aaKnown RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 BMT2Q1RMZ1 405 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 VARS2Q5ST30 1063 aaKnown RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 C9orf57Q5W0N0 161 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 RSPO2Q6UXX9 243 aaPredicted RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 HS2ST1Q7LGA3 356 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 GPR65Q8IYL9 337 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 ENGASEQ8NFI3 743 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 SUSD6Q92537 303 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 SUSD3Q96L08 255 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 TSPAN18Q96SJ8 248 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 ADAM7Q9H2U9 754 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 PDE11AQ9HCR9 933 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 DPP3Q9NY33 737 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 C2CD2Q9Y426 696 aa15.14■□□□□ 0.01
DDX41-212ENST00000511040 TIMM13Q9Y5L4 95 aaPredicted RBP15.14■□□□□ 0.01
DDX41-212ENST00000511040 SPTLC1O15269 473 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 SP100P23497 879 aaPredicted RBP15.13■□□□□ 0.01
DDX41-212ENST00000511040 OR1D2P34982 312 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 ARPP19P56211 112 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 POU5F1Q01860 360 aaKnown RBP15.13■□□□□ 0.01
DDX41-212ENST00000511040 ZP2Q05996 745 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 LMBRD2Q68DH5 695 aaPredicted RBP15.13■□□□□ 0.01
DDX41-212ENST00000511040 SCARA3Q6AZY7 606 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 CES5AQ6NT32 575 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 PDXDC1Q6P996 788 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 ANKS3Q6ZW76 656 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 ADHFE1Q8IWW8 467 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
DDX41-212ENST00000511040 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
DDX41-212ENST00000511040 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 MTRRQ9UBK8 725 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 MAPK8IP1Q9UQF2 711 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 CDY1Q9Y6F8 540 aa15.13■□□□□ 0.01
DDX41-212ENST00000511040 VCANP13611 3396 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 TNFRSF10AO00220 468 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 PIRO00625 290 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 SYN3O14994 580 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 KIAA0391O15091 583 aaKnown RBP15.12■□□□□ 0.01
DDX41-212ENST00000511040 RFPL2O75678 378 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 LILRA4P59901 499 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 CBX2Q14781 532 aaPredicted RBP15.12■□□□□ 0.01
DDX41-212ENST00000511040 LILRA6Q6PI73 481 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 DSTYKQ6XUX3 929 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 GJD3Q8N144 294 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 KREMEN2Q8NCW0 462 aa15.12■□□□□ 0.01
DDX41-212ENST00000511040 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.12■□□□□ 0.01
DDX41-212ENST00000511040 ANO9A1A5B4 782 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX41-212ENST00000511040 ITIH3Q06033 890 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 SNRNP35Q16560 246 aaKnown RBP15.11■□□□□ 0.01
DDX41-212ENST00000511040 CTXN3Q4LDR2 81 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 SMYD4Q8IYR2 804 aaPredicted RBP15.11■□□□□ 0.01
DDX41-212ENST00000511040 XXYLT1Q8NBI6 393 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 APPL2Q8NEU8 664 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 CCDC34Q96HJ3 373 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 RPGRIP1Q96KN7 1286 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 MTMR12Q9C0I1 747 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 KCTD10Q9H3F6 313 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 POMKQ9H5K3 350 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 BACE2Q9Y5Z0 518 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
DDX41-212ENST00000511040 SCN1AP35498 2009 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 C5orf42Q9H799 3197 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 CCDC195A0A1B0GUA6 201 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 H7C4K7 107 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 M0QZQ0 153 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 EXOC3O60645 756 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 ITGB3P05106 788 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 DLATP10515 647 aaKnown RBP15.1■□□□□ 0.01
DDX41-212ENST00000511040 POLR2BP30876 1174 aaKnown RBP15.1■□□□□ 0.01
DDX41-212ENST00000511040 SNRPFP62306 86 aaKnown RBP15.1■□□□□ 0.01
DDX41-212ENST00000511040 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 RAB33AQ14088 237 aa15.1■□□□□ 0.01
DDX41-212ENST00000511040 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms