RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 GPC3P51654 580 aa13.13□□□□□ -0.31
MATR3-237ENST00000509990 CUL1Q13616 776 aa13.13□□□□□ -0.31
MATR3-237ENST00000509990 LRRC45Q96CN5 670 aa13.13□□□□□ -0.31
MATR3-237ENST00000509990 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
MATR3-237ENST00000509990 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
MATR3-237ENST00000509990 FZD9O00144 591 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 PHF2O75151 1096 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 VTNP04004 478 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 OGDHQ02218 1023 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 SIX1Q15475 284 aaPredicted RBP13.12□□□□□ -0.31
MATR3-237ENST00000509990 NFIL3Q16649 462 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
MATR3-237ENST00000509990 PORCNQ9H237 461 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 RNPEPQ9H4A4 650 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 HCRTO43612 131 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
MATR3-237ENST00000509990 LYPLA2O95372 231 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 GH1P01241 217 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 CXCL8P10145 99 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 CHN1P15882 459 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 YY1P25490 414 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
MATR3-237ENST00000509990 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 PDLIM7Q9NR12 457 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 MRPL42Q9Y6G3 142 aaKnown RBP13.12□□□□□ -0.31
MATR3-237ENST00000509990 UBE4BO95155 1302 aa13.12□□□□□ -0.31
MATR3-237ENST00000509990 SHOX2O60902 331 aaPredicted RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 ZNF286BP0CG31 522 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 ITGA8P53708 1063 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 CUL2Q13617 745 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 FASTKD3Q14CZ7 662 aaKnown RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 AMHR2Q16671 573 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 ZACNQ401N2 412 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 CD101Q93033 1021 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 CAPN7Q9Y6W3 813 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 IVNS1ABPQ9Y6Y0 642 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 EXTL3O43909 919 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 TGFB2P61812 414 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 CYP4X1Q8N118 509 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 SAMD3Q8N6K7 520 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 ZNF606Q8WXB4 792 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 PRMT1Q99873 361 aaKnown RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 KAT6AQ92794 2004 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 UNGP13051 313 aaPredicted RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 TNFRSF8P28908 595 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 UBA3Q8TBC4 463 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 RAB17Q9H0T7 212 aa13.11□□□□□ -0.31
MATR3-237ENST00000509990 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
MATR3-237ENST00000509990 ECEL1O95672 775 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 CD48P09326 243 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 CETPP11597 493 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 CDO1Q16878 200 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 WDR72Q3MJ13 1102 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 KDM7AQ6ZMT4 941 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.31
MATR3-237ENST00000509990 LENG1Q96BZ8 264 aaPredicted RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 SPATA33Q96N06 139 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 MAGEB5Q9BZ81 275 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 GEMIN8Q9NWZ8 242 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 HES2Q9Y543 173 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 NR2E3Q9Y5X4 410 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 TP73O15350 636 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 RGS16O15492 202 aaPredicted RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 CYP1A2P05177 515 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 PPP2R2AP63151 447 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 CPLX4Q7Z7G2 160 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 NTPCRQ9BSD7 190 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
MATR3-237ENST00000509990 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 ZNFX1Q9P2E3 1918 aaKnown RBP13.1□□□□□ -0.31
MATR3-237ENST00000509990 H0YHG0 523 aa13.09□□□□□ -0.31
MATR3-237ENST00000509990 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
MATR3-237ENST00000509990 LAMTOR4Q0VGL1 99 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms