RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ZNF317Q96PQ6 595 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 MSTO1Q9BUK6 570 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 TRAIPQ9BWF2 469 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 MAF1Q9H063 256 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 COL11A1P12107 1806 aaPredicted RBP19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 PHIPQ8WWQ0 1821 aa19.09■□□□□ 0.65
CCHCR1-228ENST00000509552 ACSL3O95573 720 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 ZNF568Q3ZCX4 644 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 LLGL2Q6P1M3 1020 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 PASD1Q8IV76 773 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 CCDC197Q8NCU1 140 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 ASAP3Q8TDY4 903 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 SERPINB12Q96P63 405 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 AAASQ9NRG9 546 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 ANAPC5Q9UJX4 755 aa19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 MAFBQ9Y5Q3 323 aaPredicted RBP19.08■□□□□ 0.65
CCHCR1-228ENST00000509552 ASAP2O43150 1006 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 RALAP11233 206 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 GLRA2P23416 452 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 ITGA8P53708 1063 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 WNT7BP56706 349 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 NOMO3P69849 1222 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 TRIP13Q15645 432 aaPredicted RBP19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 STXBP2Q15833 593 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 ICE2Q659A1 982 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 CRELD2Q6UXH1 353 aaPredicted RBP19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 CATSPERGQ6ZRH7 1159 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 CGRRF1Q99675 332 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 DDX23Q9BUQ8 820 aaKnown RBP19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 HEMGNQ9BXL5 484 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 OSBPL7Q9BZF2 842 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 CCDC134Q9H6E4 229 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 DHX33Q9H6R0 707 aaKnown RBP19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 ANKFY1Q9P2R3 1169 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 PTPRJQ12913 1337 aa19.08■□□□□ 0.64
CCHCR1-228ENST00000509552 DOCK5Q9H7D0 1870 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 TP73O15350 636 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 CLTAP09496 248 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 CETN2P41208 172 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 SSR1P43307 286 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 LONRF1Q17RB8 773 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 ZNF365Q70YC5 407 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 PHF13Q86YI8 300 aaPredicted RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 BBOF1Q8ND07 529 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 SLC16A10Q8TF71 515 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 APOBEC3GQ9HC16 384 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 HOXC10Q9NYD6 342 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 UMODL1Q5DID0 1318 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 THAP12O43422 761 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 TTC4O95801 387 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 IVDP26440 423 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 CHKAP35790 457 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 TGFB2P61812 414 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 MAMLD1Q13495 774 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 CCNG2Q16589 344 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 ANKRD20A8PQ5CZ79 823 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 KATNAL2Q8IYT4 538 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 CCDC89Q8N998 374 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 RBBP8NLQ8NC74 664 aaPredicted RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 IPO4Q8TEX9 1081 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 HERPUD2Q9BSE4 406 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 TARS2Q9BW92 718 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 NSRP1Q9H0G5 558 aaKnown RBP19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 SAMD15Q9P1V8 674 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 GJA3Q9Y6H8 435 aa19.07■□□□□ 0.64
CCHCR1-228ENST00000509552 MYH9P35579 1960 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ATG7O95352 703 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ATP4AP20648 1035 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ARL2P36404 184 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 SP2Q02086 613 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 KLF1Q13351 362 aaPredicted RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 PLEKHA7Q6IQ23 1121 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 OSBPL8Q9BZF1 889 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 IMPG2Q9BZV3 1241 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 KDM4CQ9H3R0 1056 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 FBXO40Q9UH90 709 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 USTQ9Y2C2 406 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 R3HDM2Q9Y2K5 976 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 RLFQ13129 1914 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 VIMP08670 466 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ICAM3P32942 547 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 NOP14P78316 857 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 CNGA2Q16280 664 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 CCDC38Q502W7 563 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 LACTB2Q53H82 288 aaPredicted RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 EXOC3L1Q86VI1 746 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 LRRC34Q8IZ02 419 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 EXD1Q8NHP7 514 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ARHGEF2Q92974 986 aaKnown RBP19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 PARVAQ9NVD7 372 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 ZNF541Q9H0D2 1346 aa19.06■□□□□ 0.64
CCHCR1-228ENST00000509552 A0A0B4J269 797 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 CFHP08603 1231 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms