RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 MYO15AQ9UKN7 3530 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 PRR23AA6NEV1 266 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 I3L4J1 428 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 TKTP29401 623 aaKnown RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 BRCC3P46736 316 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 YARSP54577 528 aaKnown RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 SOX4Q06945 474 aaPredicted RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 DMP1Q13316 513 aaPredicted RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 KCTD17Q8N5Z5 321 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 PNMA5Q96PV4 448 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 RPP25Q9BUL9 199 aaKnown RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 TBC1D17Q9HA65 648 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 TOPORSQ9NS56 1045 aaPredicted RBP15.93■□□□□ 0.14
HMGCL-208ENST00000509389 KBTBD4Q9NVX7 518 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 STK17AQ9UEE5 414 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 CDH7Q9ULB5 785 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 BACE2Q9Y5Z0 518 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 CDY1Q9Y6F8 540 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 MYH11P35749 1972 aa15.93■□□□□ 0.14
HMGCL-208ENST00000509389 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 ABLIM1O14639 778 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 TRAPPC3O43617 180 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 XYLBO75191 536 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 MYL1P05976 194 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 POSTNQ15063 836 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 ANGPT1Q15389 498 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 PARM1Q6UWI2 310 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 PDILTQ8N807 584 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 ITFG1Q8TB96 612 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 FGF14Q92915 247 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 DHX58Q96C10 678 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 DDX27Q96GQ7 796 aaKnown RBP15.92■□□□□ 0.14
HMGCL-208ENST00000509389 ZMAT2Q96NC0 199 aaKnown RBP15.92■□□□□ 0.14
HMGCL-208ENST00000509389 C17orf75Q9HAS0 396 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 SLC2A4RGQ9NR83 387 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 BLOC1S4Q9NUP1 217 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
HMGCL-208ENST00000509389 SLC16A4O15374 487 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 POU2F2P09086 479 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 CCDC192P0DO97 292 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 MCF2P10911 925 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 PLCG1P19174 1290 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 RFX1P22670 979 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 PROZP22891 400 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 TYRO3Q06418 890 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 CNNM4Q6P4Q7 775 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 ANKS3Q6ZW76 656 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 FGF13Q92913 245 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 SNX27Q96L92 541 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 ACAP3Q96P50 834 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 TCHPQ9BT92 498 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 ARHGEF3Q9NR81 526 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 HCFC1R1Q9NWW0 138 aa15.91■□□□□ 0.14
HMGCL-208ENST00000509389 DNMT3BQ9UBC3 853 aaKnown RBP15.91■□□□□ 0.14
HMGCL-208ENST00000509389 PODXLO00592 558 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 MEFVO15553 781 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 KCNE1P15382 129 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 STAT6P42226 847 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 GPC5P78333 572 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 DPYDQ12882 1025 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 PHLDB3Q6NSJ2 640 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 MPZL3Q6UWV2 235 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 RTL10Q7L3V2 364 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 NKD2Q969F2 451 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 CALML4Q96GE6 196 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 ZBTB45Q96K62 511 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 NTPCRQ9BSD7 190 aaKnown RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 TIPINQ9BVW5 301 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 HOOK1Q9UJC3 728 aaKnown RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 PDCD11Q14690 1871 aaKnown RBP15.9■□□□□ 0.14
HMGCL-208ENST00000509389 CFAP54Q96N23 3096 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 SPTBN4Q9H254 2564 aa15.9■□□□□ 0.14
HMGCL-208ENST00000509389 HARSP12081 509 aaKnown RBP15.89■□□□□ 0.13
HMGCL-208ENST00000509389 RAD51AP2Q09MP3 1159 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 PNOCQ13519 176 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 PABPC1LQ4VXU2 614 aaKnown RBP15.89■□□□□ 0.13
HMGCL-208ENST00000509389 VARS2Q5ST30 1063 aaKnown RBP15.89■□□□□ 0.13
HMGCL-208ENST00000509389 RRAGBQ5VZM2 374 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 MTSS1LQ765P7 747 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 CEP57L1Q8IYX8 460 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 SYT2Q8N9I0 419 aaPredicted RBP15.89■□□□□ 0.13
HMGCL-208ENST00000509389 TRIML1Q8N9V2 468 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 SPIRE2Q8WWL2 714 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 C18orf25Q96B23 403 aaPredicted RBP15.89■□□□□ 0.13
HMGCL-208ENST00000509389 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 PLIN2Q99541 437 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 CNTN3Q9P232 1028 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 DMDP11532 3685 aa15.89■□□□□ 0.13
HMGCL-208ENST00000509389 CAVIN2O95810 425 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms