RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 C11orf84Q9BUA3 381 aaPredicted RBP16■□□□□ 0.15
RNF4-213ENST00000509388 PIRO00625 290 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 KIF4AO95239 1232 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 C4BPAP04003 597 aaKnown RBP15.99■□□□□ 0.15
RNF4-213ENST00000509388 PAX3P23760 479 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 TAF6P49848 677 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 NCOA4Q13772 614 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 ZACNQ401N2 412 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 CDKAL1Q5VV42 579 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 TDRD10Q5VZ19 366 aaKnown RBP15.99■□□□□ 0.15
RNF4-213ENST00000509388 DSTYKQ6XUX3 929 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 KLHL23Q8NBE8 558 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 FBXO22Q8NEZ5 403 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 HASPINQ8TF76 798 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 STK39Q9UEW8 545 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 ADAM28Q9UKQ2 775 aa15.99■□□□□ 0.15
RNF4-213ENST00000509388 TMEM189-UBE2V1I3L0A0 370 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 FGF18O76093 207 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 ARHGEF15O94989 841 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 PIK3CAP42336 1068 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 FMO5P49326 533 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 MCCD1P59942 119 aaPredicted RBP15.98■□□□□ 0.15
RNF4-213ENST00000509388 MYL7Q01449 175 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
RNF4-213ENST00000509388 BMS1Q14692 1282 aaKnown RBP15.98■□□□□ 0.15
RNF4-213ENST00000509388 SV2CQ496J9 727 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 C1orf220Q5T0J3 134 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 LRRC52Q8N7C0 313 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 HPDLQ96IR7 371 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 ZNF576Q9H609 170 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 TAB2Q9NYJ8 693 aa15.98■□□□□ 0.15
RNF4-213ENST00000509388 SF3B1O75533 1304 aaKnown RBP eCLIP15.97■□□□□ 0.151e-6■■■■■ 109.1
RNF4-213ENST00000509388 TMEM265A0A087WTH1 108 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 ANO9A1A5B4 782 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 ARHGEF37A1IGU5 675 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 C5orf67F2Z3F1 127 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 P4HA2O15460 535 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 CST3P01034 146 aaPredicted RBP15.97■□□□□ 0.15
RNF4-213ENST00000509388 LINC00271P0C7V0 271 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 ATICP31939 592 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 PLCB3Q01970 1234 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 GPM6BQ13491 265 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 KRT31Q15323 416 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 SGSM1Q2NKQ1 1148 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 FILIP1LQ4L180 1135 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 WDR44Q5JSH3 913 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 KIAA1841Q6NSI8 718 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 FUT10Q6P4F1 479 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 TMEM130Q8N3G9 435 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 FBXL13Q8NEE6 735 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 VPS16Q9H269 839 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 NDST4Q9H3R1 872 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 MARCH5Q9NX47 278 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 SIX4Q9UIU6 781 aa15.97■□□□□ 0.15
RNF4-213ENST00000509388 COL4A6Q14031 1691 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 KPNA7A9QM74 516 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 F8W810 466 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 PPEF2O14830 753 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 SERPINC1P01008 464 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 HLA-DRAP01903 254 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 P4HA1P13674 534 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 ZNF18P17022 549 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 CA8P35219 290 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 BRCC3P46736 316 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 LILRA4P59901 499 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 MYL6P60660 151 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 TNNC1P63316 161 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 ZNF699Q32M78 642 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 CBWD6Q4V339 395 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 CBWD3Q5JTY5 395 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 HABP4Q5JVS0 413 aaKnown RBP15.96■□□□□ 0.15
RNF4-213ENST00000509388 CBWD5Q5RIA9 395 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 FKBP15Q5T1M5 1219 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 FAM171A1Q5VUB5 890 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 C15orf39Q6ZRI6 1047 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 DDX53Q86TM3 631 aaKnown RBP15.96■□□□□ 0.15
RNF4-213ENST00000509388 TMEM173Q86WV6 379 aaPredicted RBP15.96■□□□□ 0.15
RNF4-213ENST00000509388 MICAL1Q8TDZ2 1067 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 TAS1R2Q8TE23 839 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 TAF4BQ92750 862 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 ALG13Q9NP73 1137 aaKnown RBP15.96■□□□□ 0.15
RNF4-213ENST00000509388 RAB20Q9NX57 234 aa15.96■□□□□ 0.15
RNF4-213ENST00000509388 LIMA1Q9UHB6 759 aaKnown RBP15.96■□□□□ 0.15
RNF4-213ENST00000509388 PTPRSQ13332 1948 aa15.96■□□□□ 0.14
RNF4-213ENST00000509388 FNDC1Q4ZHG4 1894 aaPredicted RBP15.95■□□□□ 0.14
RNF4-213ENST00000509388 H3BNC9 293 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 LPXNO60711 386 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 ITGB1P05556 798 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 ATP1A3P13637 1013 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 COPB1P53618 953 aaKnown RBP15.95■□□□□ 0.14
RNF4-213ENST00000509388 UBE3AQ05086 875 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 WDR72Q3MJ13 1102 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 TIGD5Q53EQ6 642 aa15.95■□□□□ 0.14
RNF4-213ENST00000509388 ZNF667Q5HYK9 610 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms