RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 LPIN1Q14693 890 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 BEST2Q8NFU1 509 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 SYT11Q9BT88 431 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 FRMPD3Q5JV73 1810 aa13.52□□□□□ -0.24
LYSMD3-204ENST00000509384 RCCD1A6NED2 376 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 DDX3XO00571 662 aaKnown RBP eCLIP13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 TNFAIP3P21580 790 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 ATICP31939 592 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 GUCY2FP51841 1108 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 GNG11P61952 73 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 RBP5P82980 135 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 ALKBH5Q6P6C2 394 aaKnown RBP13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 SCARA5Q6ZMJ2 495 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 CAGE1Q8TC20 777 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 SLC20A1Q8WUM9 679 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 AGPAT1Q99943 283 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 FAM105AQ9NUU6 356 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 KLK14Q9P0G3 267 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 NAGPAQ9UK23 515 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 GUCA1BQ9UMX6 200 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 TFR2Q9UP52 801 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 PCDHB4Q9Y5E5 795 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
LYSMD3-204ENST00000509384 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 P4HA1P13674 534 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 CYP11B1P15538 503 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 CDK7P50613 346 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 BPIFB4P59827 614 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 NAB2Q15742 525 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 FBXO46Q6PJ61 603 aaPredicted RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 NOP9Q86U38 636 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 SLC47A2Q86VL8 602 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 RPUSD2Q8IZ73 545 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 TMEM130Q8N3G9 435 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 OLIG1Q8TAK6 271 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 CXorf38Q8TB03 319 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 FAXDC2Q96IV6 333 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 OSBPL7Q9BZF2 842 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 LACRTQ9GZZ8 138 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 CXCL16Q9H2A7 254 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 DNAI1Q9UI46 699 aa13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 NOCTQ9UK39 431 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
LYSMD3-204ENST00000509384 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ABL1P00519 1130 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ITGA4P13612 1032 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 KCNE1P15382 129 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ASPAP45381 313 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 RAB27AP51159 221 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 BFSP2Q13515 415 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 TAF3Q5VWG9 929 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 TMEM270Q6UE05 265 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 HPDLQ96IR7 371 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ZNF333Q96JL9 665 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 IRX2Q9BZI1 471 aaPredicted RBP13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 BRCA2P51587 3418 aa13.5□□□□□ -0.25
LYSMD3-204ENST00000509384 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
LYSMD3-204ENST00000509384 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms