RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 POMKQ9H5K3 350 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 GOLGA2P5Q9HBQ8 144 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 CHST7Q9NS84 486 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 FNIP2Q9P278 1114 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 PTPRJQ12913 1337 aa9.51□□□□□ -0.89
PDLIM5-213ENST00000509357 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 GOLGA8IPA6NC78 632 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 GOLGA6L4A6NEF3 574 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 GOLGA8JA6NMD2 632 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 I3L4J1 428 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 BIN1O00499 593 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 PODXLO00592 558 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 CLIC2O15247 247 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 TGM5O43548 720 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 GPR37L1O60883 481 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 ADRB2P07550 413 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 CLTAP09496 248 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 CXCL8P10145 99 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 PRCPP42785 496 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 AMPD3Q01432 767 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 SPAG1Q07617 926 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 MORC3Q14149 939 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 ENOX2Q16206 610 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 KYAT1Q16773 422 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 RBM43Q6ZSC3 357 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 CCDC149Q6ZUS6 474 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 GPR149Q86SP6 731 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 RNF168Q8IYW5 571 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 KREMEN2Q8NCW0 462 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 HVCN1Q96D96 273 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 SAAL1Q96ER3 474 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 KIF12Q96FN5 646 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 PCIF1Q9H4Z3 704 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 RPF1Q9H9Y2 349 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 CPSF3Q9UKF6 684 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 HCN4Q9Y3Q4 1203 aa9.5□□□□□ -0.89
PDLIM5-213ENST00000509357 TRIM49BA6NDI0 452 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 C2CD4DB7Z1M9 353 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 RFPL2O75678 378 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 EFEMP2O95967 443 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 MYL1P05976 194 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 KCNE1P15382 129 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 RPL9P32969 192 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 BRCC3P46736 316 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 CASP4P49662 377 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 ACOT2P49753 483 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 GUCY2FP51841 1108 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PPP2R3AQ06190 1150 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 UPP1Q16831 310 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 OTOP3Q7RTS5 596 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 EFCAB13Q8IY85 973 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 GPR65Q8IYL9 337 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 SYCP3Q8IZU3 236 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PLCD3Q8N3E9 789 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 C3orf58Q8NDZ4 430 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 LNX1Q8TBB1 728 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 SMG7Q92540 1137 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 EDAQ92838 391 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 GBP4Q96PP9 640 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 ACCSQ96QU6 501 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 LRRC27Q9C0I9 530 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PLEKHA5Q9HAU0 1116 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 EXOC1Q9NV70 894 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 DMAC2Q9NW81 257 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 EXOC7Q9UPT5 735 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 PLXNA3P51805 1871 aa9.49□□□□□ -0.89
PDLIM5-213ENST00000509357 TTC26A0AVF1 554 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 PPEF2O14830 753 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 OGTO15294 1046 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 XPOTO43592 962 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 KINO60870 393 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 FGFR3P22607 806 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 TKTP29401 623 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ELF1P32519 619 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 OR1D2P34982 312 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ARPP19P56211 112 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ZXDAP98168 799 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ZBTB6Q15916 424 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 KNOP1Q1ED39 458 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 PPM1LQ5SGD2 360 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 C1orf220Q5T0J3 134 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ZNF658Q5TYW1 1059 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 SLFN12LQ6IEE8 588 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 C15orf39Q6ZRI6 1047 aa9.48□□□□□ -0.89
PDLIM5-213ENST00000509357 ANKS3Q6ZW76 656 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms