RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 DHX58Q96C10 678 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 FGFBP2Q9BYJ0 223 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 KCNK12Q9HB15 430 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 HCFC1R1Q9NWW0 138 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 CPSF3Q9UKF6 684 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 AGO2Q9UKV8 859 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 UBQLN1Q9UMX0 589 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 TIMM13Q9Y5L4 95 aaPredicted RBP16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 BACE2Q9Y5Z0 518 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 TSC2P49815 1807 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 WDR27A2RRH5 827 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 SYN3O14994 580 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 PPP6R2O75170 966 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 NFICP08651 508 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 FSHRP23945 695 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 ABCD1P33897 745 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 POMGNT1Q8WZA1 660 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 ST6GALNAC4Q9H4F1 302 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 PANK4Q9NVE7 773 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 SEL1LQ9UBV2 794 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 MORC2Q9Y6X9 1032 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-228ENST00000508974 NOTCH4Q99466 2003 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 H7C4K7 107 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 PRRG1O14668 218 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 XPOTO43592 962 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 CUTAO60888 179 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 XYLBO75191 536 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 PPP1R37O75864 691 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 YEATS4O95619 227 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 CPB1P15086 417 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 LRPAP1P30533 357 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 VCPP55072 806 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 TDGQ13569 410 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 ZBTB6Q15916 424 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 IER5LQ5T953 404 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 ZNF280DQ6N043 979 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 BMP8AQ7Z5Y6 402 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 HPS3Q969F9 1004 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 ACCSQ96QU6 501 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 RHOBTB2Q9BYZ6 727 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 PCDHB8Q9UN66 801 aa16.08■□□□□ 0.16
UBE2D3-228ENST00000508974 SCN1AP35498 2009 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 OR4Q2P0C623 313 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 CYP3A5P20815 502 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 ELF1P32519 619 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 ME1P48163 572 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 SLFN12LQ6IEE8 588 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 SLC8B1Q6J4K2 584 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 ZSWIM2Q8NEG5 633 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 APPL2Q8NEU8 664 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 BEST2Q8NFU1 509 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 ING5Q8WYH8 240 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 HVCN1Q96D96 273 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 FAM213AQ9BRX8 229 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 MUC6Q6W4X9 2439 aa16.07■□□□□ 0.16
UBE2D3-228ENST00000508974 GOLGA8IPA6NC78 632 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 GOLGA8JA6NMD2 632 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 TBC1D4O60343 1298 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 PAPLNO95428 1278 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 SEC24AO95486 1093 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 LRG1P02750 347 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 CFHP08603 1231 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 LAMP2P13473 410 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 ADSSP30520 456 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 HOXA9P31269 272 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 CDR1P51861 262 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 YWHAHQ04917 246 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 MRPL58Q14197 206 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 E2F4Q16254 413 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 SPATA1Q5VX52 437 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 CCDC65Q8IXS2 484 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 ZNF461Q8TAF7 563 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 STRA6Q9BX79 667 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 OLFML3Q9NRN5 406 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.06■□□□□ 0.165e-9■■□□□ 11.8
UBE2D3-228ENST00000508974 EPS15L1Q9UBC2 864 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 DNMT3BQ9UBC3 853 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 FBXL21Q9UKT6 434 aa16.06■□□□□ 0.16
UBE2D3-228ENST00000508974 EXOC7Q9UPT5 735 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms