RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PDCP20941 246 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 LRPAP1P30533 357 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 MATR3P43243 847 aaKnown RBP eCLIP17.67■□□□□ 0.42
LMNA-222ENST00000508500 LIG4P49917 911 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 CLCN5P51795 746 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
LMNA-222ENST00000508500 PARM1Q6UWI2 310 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 SIX5Q8N196 739 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 FLCNQ8NFG4 579 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 DDX12PQ92771 950 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 ATOH1Q92858 354 aaPredicted RBP17.67■□□□□ 0.42
LMNA-222ENST00000508500 FGF13Q92913 245 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 BICD1Q96G01 975 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 INTS4Q96HW7 963 aaKnown RBP17.67■□□□□ 0.42
LMNA-222ENST00000508500 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 CDH7Q9ULB5 785 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 A0A0B4J269 797 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 NRG2O14511 850 aaPredicted RBP17.66■□□□□ 0.42
LMNA-222ENST00000508500 PPEF2O14830 753 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 HNRNPDLO14979 420 aaKnown RBP17.66■□□□□ 0.42
LMNA-222ENST00000508500 OGTO15294 1046 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 SRFP11831 508 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 AOC1P19801 751 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 MCM4P33991 863 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 MAP4K3Q8IVH8 894 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 GPR152Q8TDT2 470 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 NXPE3Q969Y0 559 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 KIF12Q96FN5 646 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 MFSD1Q9H3U5 465 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 CPSF3Q9UKF6 684 aaKnown RBP17.66■□□□□ 0.42
LMNA-222ENST00000508500 DENND4CQ5VZ89 1909 aa17.66■□□□□ 0.42
LMNA-222ENST00000508500 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
LMNA-222ENST00000508500 A0A087X0B3 334 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 PRR23AA6NEV1 266 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 MYMKA6NI61 221 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 M0QZQ0 153 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 XYLBO75191 536 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
LMNA-222ENST00000508500 ATF2P15336 505 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 CYP3A5P20815 502 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.42
LMNA-222ENST00000508500 ARPP19P56211 112 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 RTL10Q7L3V2 364 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 DYMQ7RTS9 669 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 RASSF8Q8NHQ8 419 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 STRA6Q9BX79 667 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 ST6GALNAC4Q9H4F1 302 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 FBXL21Q9UKT6 434 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 CA14Q9ULX7 337 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 UBQLN1Q9UMX0 589 aaKnown RBP17.65■□□□□ 0.42
LMNA-222ENST00000508500 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 TIMM13Q9Y5L4 95 aaPredicted RBP17.65■□□□□ 0.42
LMNA-222ENST00000508500 ZFP37Q9Y6Q3 630 aaPredicted RBP17.65■□□□□ 0.42
LMNA-222ENST00000508500 WDR87Q6ZQQ6 2873 aa17.65■□□□□ 0.42
LMNA-222ENST00000508500 ZNF292O60281 2723 aa17.64■□□□□ 0.42
LMNA-222ENST00000508500 H7C4K7 107 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 PPP1R37O75864 691 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 VNN2O95498 520 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 PPP2R3AQ06190 1150 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 CTXN3Q4LDR2 81 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
LMNA-222ENST00000508500 ZNF720Q7Z2F6 126 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 SFR1Q86XK3 245 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 NPAS3Q8IXF0 933 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 TCEAL8Q8IYN2 117 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 ING5Q8WYH8 240 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 RPF1Q9H9Y2 349 aaKnown RBP17.64■□□□□ 0.41
LMNA-222ENST00000508500 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 COL4A2P08572 1712 aa17.64■□□□□ 0.41
LMNA-222ENST00000508500 GVINP1Q7Z2Y8 2422 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 K7ELQ4 463 aaPredicted RBP17.63■□□□□ 0.41
LMNA-222ENST00000508500 TBCAO75347 108 aaKnown RBP17.63■□□□□ 0.41
LMNA-222ENST00000508500 RHOP08100 348 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 SCP2P22307 547 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 ACOT2P49753 483 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 KCNA1Q09470 495 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 SLC39A14Q15043 492 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 SPATA1Q5VX52 437 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 JADE1Q6IE81 842 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 RNF19BQ6ZMZ0 732 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 MSTO1Q9BUK6 570 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 CYP4F11Q9HBI6 524 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 SLC2A4RGQ9NR83 387 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 STK17AQ9UEE5 414 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 KCNH3Q9ULD8 1083 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 INSL5Q9Y5Q6 135 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 MORC2Q9Y6X9 1032 aaPredicted RBP17.63■□□□□ 0.41
LMNA-222ENST00000508500 PATJQ8NI35 1801 aa17.63■□□□□ 0.41
LMNA-222ENST00000508500 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
LMNA-222ENST00000508500 SPTLC1O15269 473 aa17.62■□□□□ 0.41
LMNA-222ENST00000508500 STX6O43752 255 aa17.62■□□□□ 0.41
LMNA-222ENST00000508500 OAZ2O95190 189 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms