RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 KLHL17Q6TDP4 642 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 LINC00114Q6XXX2 140 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 CHSY3Q70JA7 882 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ZNF765Q7L2R6 523 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 GALNTL5Q7Z4T8 443 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 MICU3Q86XE3 530 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 SP8Q8IXZ3 490 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 AFAP1L1Q8TED9 768 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 GAB3Q8WWW8 586 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 HOXB13Q92826 284 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 TRIM43Q96BQ3 446 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 TBC1D31Q96DN5 1066 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 NEIL1Q96FI4 390 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ASIC4Q96FT7 647 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 SUCLG2Q96I99 432 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 HEXIM2Q96MH2 286 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 TWNKQ96RR1 684 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 YME1L1Q96TA2 773 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ADPGKQ9BRR6 497 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 C1orf43Q9BWL3 253 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 MRPL9Q9BYD2 267 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 KIAA1683Q9H0B3 1180 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 USP44Q9H0E7 712 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 PABPC3Q9H361 631 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 TAF1DQ9H5J8 278 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 GOLGA2P5Q9HBQ8 144 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 SERHLQ9NQF3 203 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 PRDM5Q9NQX1 630 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 RBM12Q9NTZ6 932 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 PIH1D1Q9NWS0 290 aaKnown RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ERVK13-1Q9NX77 482 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 RGL1Q9NZL6 768 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 COA3Q9Y2R0 106 aaPredicted RBP4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 ZNF711Q9Y462 761 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 RUSC2Q8N2Y8 1516 aa4.5□□□□□ -1.69
ATP2C1-213ENST00000508297 GAPVD1Q14C86 1478 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TMEM233B4DJY2 109 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 BTN3A1O00481 513 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 KRIT1O00522 736 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SGTAO43765 313 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CSF1P09603 554 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 PSMA3P25788 255 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 ITGB7P26010 798 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 ABCD3P28288 659 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TNNT3P45378 269 aaPredicted RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CCT4P50991 539 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CCR9P51686 369 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 VAMP2P63027 116 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TLE1Q04724 770 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 GRIN1Q05586 938 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 AOC3Q16853 763 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SGO2Q562F6 1265 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 STEAP3Q658P3 488 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SLFN12LQ6IEE8 588 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 BBS12Q6ZW61 710 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 RNF44Q7L0R7 432 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 RRAGAQ7L523 313 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 KDELC2Q7Z4H8 507 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 R3HCC1LQ7Z5L2 792 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TSPYL5Q86VY4 417 aaPredicted RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 FBXO11Q86XK2 927 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CREG2Q8IUH2 290 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 NGEFQ8N5V2 710 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 VGLL2Q8N8G2 317 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 NAT8LQ8N9F0 302 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CEP70Q8NHQ1 597 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 THAP4Q8WY91 577 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 NSUN4Q96CB9 384 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 FAM167AQ96KS9 214 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 PRPF18Q99633 342 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 GPATCH1Q9BRR8 931 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 DDX23Q9BUQ8 820 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 OSBPL6Q9BZF3 934 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 DPH1Q9BZG8 443 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 XPO4Q9C0E2 1151 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CHST8Q9H2A9 424 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 MTG2Q9H4K7 406 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TMEM8AQ9HCN3 771 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SARS2Q9NP81 518 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 NECTIN3Q9NQS3 549 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 UCKL1Q9NWZ5 548 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 TMOD4Q9NZQ9 345 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 BTBD7Q9P203 1132 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 HERC5Q9UII4 1024 aaKnown RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 RPS6KA6Q9UK32 745 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 AJAP1Q9UKB5 411 aaPredicted RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 ZHX1Q9UKY1 873 aaPredicted RBP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 GPRASP1Q5JY77 1395 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 CHD1O14646 1710 aa4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 AQRO60306 1485 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATP2C1-213ENST00000508297 SOS1Q07889 1333 aaPredicted RBP4.48□□□□□ -1.69
ATP2C1-213ENST00000508297 C17orf113A0A1B0GUU1 675 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms