RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PPP1R35Q8TAP8 253 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 IPCEF1Q8WWN9 437 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-206ENST00000507875 CDHR1Q96JP9 859 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 SLC13A1Q9BZW2 595 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 SUDS3Q9H7L9 328 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-206ENST00000507875 VAT1LQ9HCJ6 419 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 NLRC4Q9NPP4 1024 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 HOXC10Q9NYD6 342 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 RABL2AQ9UBK7 228 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-206ENST00000507875 SUN2Q9UH99 717 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 ADAMTS5Q9UNA0 930 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 GPR55Q9Y2T6 319 aaPredicted RBP7.79□□□□□ -1.16
CLCN3-206ENST00000507875 CEP83Q9Y592 693 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 THSD7BQ9C0I4 1608 aa7.79□□□□□ -1.16
CLCN3-206ENST00000507875 H3BRJ5 948 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 RHOBTB3O94955 611 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 FOSL1P15407 271 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 TNFAIP3P21580 790 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CMA1P23946 247 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 HOXA7P31268 230 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 HOXC13P31276 330 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ABCD1P33897 745 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ECI1P42126 302 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 PIK3CAP42336 1068 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 USP11P51784 963 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GUCY1A3Q02108 690 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SNW1Q13573 536 aaKnown RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CLUL1Q15846 466 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ALFQ53S48 1182 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GTF2IRD2BQ6EKJ0 949 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 IGF2-ASQ6U949 168 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 LBX2Q6XYB7 198 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GTF2IRD2Q86UP8 949 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 TRIM59Q8IWR1 403 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SHISA4Q96DD7 197 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 MENTQ9BUN1 341 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 PSTPIP2Q9H939 334 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CGGBP1Q9UFW8 167 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 PCDHA1Q9Y5I3 950 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SRPRBQ9Y5M8 271 aaKnown RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 PABPN1LA6NDY0 278 aaKnown RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 DLL1O00548 723 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GDF9O60383 454 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SLURP2P0DP57 97 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 RHCEP18577 417 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CD247P20963 164 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ME1P48163 572 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 TOB1P50616 345 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ZNF131P52739 623 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 RHDQ02161 417 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SPP2Q13103 211 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 VGLL4Q14135 290 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 COG2Q14746 738 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SHROOM1Q2M3G4 852 aaPredicted RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 JAKMIP3Q5VZ66 844 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 PPP4R3AQ6IN85 833 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SASS6Q6UVJ0 657 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CATSPERGQ6ZRH7 1159 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 FAM186BQ8IYM0 893 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ENGASEQ8NFI3 743 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SH3KBP1Q96B97 665 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CENPTQ96BT3 561 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 HERPUD2Q9BSE4 406 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 XPO4Q9C0E2 1151 aaKnown RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 MKRN2Q9H000 416 aaKnown RBP7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GOLPH3LQ9H4A5 285 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 CYP26B1Q9NR63 512 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 GJB4Q9NTQ9 266 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 EMC9Q9Y3B6 208 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 SPEF1Q9Y4P9 236 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 ZHX2Q9Y6X8 837 aa7.78□□□□□ -1.16
CLCN3-206ENST00000507875 A0A0G2JLL6 359 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 FAM155AB1AL88 458 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CAVIN2O95810 425 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 VCAM1P19320 739 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 OAS2P29728 719 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 SLC16A2P36021 539 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CTBSQ01459 385 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 LRRC32Q14392 662 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 TAF11Q15544 211 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 ANO6Q4KMQ2 910 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PRAMEF18Q5VWM3 479 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CCDC73Q6ZRK6 1079 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 UBE2R2Q712K3 238 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 PRRT2Q7Z6L0 340 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 NEK8Q86SG6 692 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 ANKRD13BQ86YJ7 626 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 MCATQ8IVS2 390 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 IQCF2Q8IXL9 164 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 MRPS27Q92552 414 aaKnown RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 GOLGA1Q92805 767 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 DIO2Q92813 273 aa7.77□□□□□ -1.17
CLCN3-206ENST00000507875 ZKSCAN4Q969J2 545 aaPredicted RBP7.77□□□□□ -1.17
CLCN3-206ENST00000507875 TBC1D31Q96DN5 1066 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms