RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 OR5B17Q8NGF7 314 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 TAF4BQ92750 862 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 SLC35C1Q96A29 364 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 TUBGCP2Q9BSJ2 902 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 CXCL16Q9H2A7 254 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 MMRN2Q9H8L6 949 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 GOLGA2P5Q9HBQ8 144 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 LZTS1Q9Y250 596 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 SSX2IPQ9Y2D8 614 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 PTPRSQ13332 1948 aa21.64■■□□□ 1.05
USP53-203ENST00000507597 TDRD15B5MCY1 1934 aaKnown RBP21.63■■□□□ 1.05
USP53-203ENST00000507597 PES1O00541 588 aaKnown RBP21.63■■□□□ 1.05
USP53-203ENST00000507597 PIRO00625 290 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 POLR2BP30876 1174 aaKnown RBP21.63■■□□□ 1.05
USP53-203ENST00000507597 GCLMP48507 274 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 WNT7BP56706 349 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 DLG4P78352 724 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 SOX4Q06945 474 aaPredicted RBP21.63■■□□□ 1.05
USP53-203ENST00000507597 IQCB1Q15051 598 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 SGSM1Q2NKQ1 1148 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 WDR44Q5JSH3 913 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 ZNF697Q5TEC3 545 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 CDKAL1Q5VV42 579 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 DHX40Q8IX18 779 aaKnown RBP21.63■■□□□ 1.05
USP53-203ENST00000507597 PLEKHO2Q8TD55 490 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 LMAN2LQ9H0V9 348 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 ZNF576Q9H609 170 aa21.63■■□□□ 1.05
USP53-203ENST00000507597 NT5C1B-RDH14C9J2C7 533 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 LPXNO60711 386 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 FGF18O76093 207 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 PIK3CAP42336 1068 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 FMO5P49326 533 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 NCOA4Q13772 614 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 NCAPHQ15003 741 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 PDE12Q6L8Q7 609 aaKnown RBP21.62■■□□□ 1.05
USP53-203ENST00000507597 PDXDC1Q6P996 788 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 DSTYKQ6XUX3 929 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 DDX53Q86TM3 631 aaKnown RBP21.62■■□□□ 1.05
USP53-203ENST00000507597 IRF2BP1Q8IU81 584 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 KLHL23Q8NBE8 558 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 FBXL13Q8NEE6 735 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 ZNF516Q92618 1163 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 C17orf80Q9BSJ5 609 aa21.62■■□□□ 1.05
USP53-203ENST00000507597 H3BNC9 293 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 STAU1O95793 577 aaKnown RBP21.61■■□□□ 1.05
USP53-203ENST00000507597 MYL7Q01449 175 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 GPM6BQ13491 265 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 PTPROQ16827 1216 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 VWA3BQ502W6 1294 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 FKBP15Q5T1M5 1219 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 TDRD10Q5VZ19 366 aaKnown RBP21.61■■□□□ 1.05
USP53-203ENST00000507597 FUT10Q6P4F1 479 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 APPL2Q8NEU8 664 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 ARNTL2Q8WYA1 636 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 HPDLQ96IR7 371 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 FAXDC2Q96IV6 333 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 DNAI2Q9GZS0 605 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 RAB20Q9NX57 234 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 DSEQ9UL01 958 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 MTUS1Q9ULD2 1270 aa21.61■■□□□ 1.05
USP53-203ENST00000507597 PTPRJQ12913 1337 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 KPNA7A9QM74 516 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 KIF4AO95239 1232 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 GUCY2FP51841 1108 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 LILRA4P59901 499 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 PPP3CAQ08209 521 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 USP41Q3LFD5 358 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 HSP90AA4PQ58FG1 418 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 HABP4Q5JVS0 413 aaKnown RBP21.6■■□□□ 1.05
USP53-203ENST00000507597 KIAA1841Q6NSI8 718 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 C15orf39Q6ZRI6 1047 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 DPH6Q7L8W6 267 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 GPR65Q8IYL9 337 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 NDST4Q9H3R1 872 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 HCSTQ9UBK5 93 aa21.6■■□□□ 1.05
USP53-203ENST00000507597 LIMA1Q9UHB6 759 aaKnown RBP21.6■■□□□ 1.05
USP53-203ENST00000507597 GTPBP10A4D1E9 387 aaKnown RBP21.59■■□□□ 1.05
USP53-203ENST00000507597 LRRC10BA6NIK2 292 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 SYN3O14994 580 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 HUS1O60921 280 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 SERPINC1P01008 464 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 FAM163BP0C2L3 166 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 LINC00271P0C7V0 271 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 ODC1P11926 461 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 ZNF18P17022 549 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 TNNC1P63316 161 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 ZNF699Q32M78 642 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 C1orf220Q5T0J3 134 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 LUZP1Q86V48 1076 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 METTL23Q86XA0 190 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 SUSD3Q96L08 255 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 FAM81BQ96LP2 452 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 PAAF1Q9BRP4 392 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 OXCT2Q9BYC2 517 aaPredicted RBP21.59■■□□□ 1.05
USP53-203ENST00000507597 VRTNQ9H8Y1 702 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 SIX4Q9UIU6 781 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 COQ4Q9Y3A0 265 aa21.59■■□□□ 1.05
USP53-203ENST00000507597 B4GALT3O60512 393 aa21.58■■□□□ 1.05
USP53-203ENST00000507597 CST3P01034 146 aaPredicted RBP21.58■■□□□ 1.05
USP53-203ENST00000507597 HLA-DRAP01903 254 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms