RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PDXDC1Q6P996 788 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 PRR23CQ6ZRP0 262 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PDZD4Q76G19 769 aaPredicted RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 RUFY3Q7L099 469 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 YAF2Q8IY57 180 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 DEPTORQ8TB45 409 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 CLDN23Q96B33 292 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 ELSPBP1Q96BH3 223 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 NAP1L4Q99733 375 aaKnown RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 ADPGKQ9BRR6 497 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 TRMT61BQ9BVS5 477 aaKnown RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 ZFP14Q9HCL3 533 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PRMT8Q9NR22 394 aaPredicted RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 SEMA4GQ9NTN9 838 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 RBM12Q9NTZ6 932 aaKnown RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 PRMT7Q9NVM4 692 aaPredicted RBP6.35□□□□□ -1.39
GYPB-208ENST00000507009 MTRRQ9UBK8 725 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 KCNH3Q9ULD8 1083 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PCDHA12Q9UN75 941 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 CYP46A1Q9Y6A2 500 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PIAS3Q9Y6X2 628 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 EPG5Q9HCE0 2579 aa6.35□□□□□ -1.39
GYPB-208ENST00000507009 PDCD11Q14690 1871 aaKnown RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 ARHGEF35A5YM69 484 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SLC38A8A6NNN8 435 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 MAN2B1O00754 1011 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SLC30A4O14863 429 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ZNF263O14978 683 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 AXIN1O15169 862 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 PAPLNO95428 1278 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SEC24AO95486 1093 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ADH1BP00325 375 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 RETP07949 1114 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 FGFR3P22607 806 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 FCARP24071 287 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 HOXC13P31276 330 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CXCL12P48061 93 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SOX9P48436 509 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CCR3P51677 355 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ROR1Q01973 937 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SPIRE1Q08AE8 756 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 FZD5Q13467 585 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 SF3A2Q15428 464 aaKnown RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 MAPK6Q16659 721 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 UVSSAQ2YD98 709 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CYP4A22Q5TCH4 519 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 VITQ6UXI7 678 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 GPR65Q8IYL9 337 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ELMOD1Q8N336 334 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CELF5Q8N6W0 485 aaKnown RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 FAM200AQ8TCP9 573 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 NETO1Q8TDF5 533 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CSGALNACT1Q8TDX6 532 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 DNASE1L2Q92874 299 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 KCNB2Q92953 911 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ZSWIM3Q96MP5 696 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 KIFC3Q9BVG8 833 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 FAM126AQ9BYI3 521 aaPredicted RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 AGXT2Q9BYV1 514 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 CHRDQ9H2X0 955 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 TTC12Q9H892 705 aaPredicted RBP6.34□□□□□ -1.39
GYPB-208ENST00000507009 ANKEF1Q9NU02 776 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 GDE1Q9NZC3 331 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 TRIP11Q15643 1979 aa6.34□□□□□ -1.39
GYPB-208ENST00000507009 ACACBO00763 2458 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 MAP1BP46821 2468 aaKnown RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 WDR27A2RRH5 827 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 SHISA7A6NL88 538 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 ZNF197O14709 1029 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 TRAPPC3O43617 180 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 NEMFO60524 1076 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 CDKL5O76039 1030 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 EDN1P05305 212 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 CPB1P15086 417 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 PSMC3P17980 439 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 FECHP22830 423 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 KRT2P35908 639 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 CCR2P41597 374 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 PXNP49023 591 aaPredicted RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 CDR1P51861 262 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 YARSP54577 528 aaKnown RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 POU5F1BQ06416 359 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 SCRN1Q12765 414 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 TWF1Q12792 350 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 TEAD2Q15562 447 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 NAB2Q15742 525 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 CTXN3Q4LDR2 81 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 SMYD5Q6GMV2 418 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 IQCEQ6IPM2 695 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 Q6ZS52 159 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 METTL3Q86U44 580 aaKnown RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 FAM160A2Q8N612 972 aaPredicted RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
GYPB-208ENST00000507009 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
GYPB-208ENST00000507009 BSNDQ8WZ55 320 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms