RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MYADMQ96S97 322 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 SMOC2Q9H3U7 446 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 KCNK12Q9HB15 430 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 OLFML3Q9NRN5 406 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 UBQLN1Q9UMX0 589 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 ANK1P16157 1881 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 NOTCH4Q99466 2003 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 WDR27A2RRH5 827 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 M0QZQ0 153 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 SPTLC2O15270 562 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 PDGFBP01127 241 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 GAP43P17677 238 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 ADSSP30520 456 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 STAT6P42226 847 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 MATR3P43243 847 aaKnown RBP eCLIP9.87□□□□□ -0.838e-7■□□□□ 10.3
PDLIM5-209ENST00000506632 POU5F1Q01860 360 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 ROR1Q01973 937 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 SPAG1Q07617 926 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 STK38Q15208 465 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 E2F4Q16254 413 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 PPM1LQ5SGD2 360 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 AXDND1Q5T1B0 1012 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 SPATA1Q5VX52 437 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 HSCBQ8IWL3 235 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 CD302Q8IX05 232 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 SLC7A14Q8TBB6 771 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 FAM122AQ96E09 287 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 ZNF396Q96N95 335 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 MSTO1Q9BUK6 570 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 IKZF4Q9H2S9 585 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 RPF1Q9H9Y2 349 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 PIDD1Q9HB75 910 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 IGSF9Q9P2J2 1179 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 TFIP11Q9UBB9 837 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 FBXL5Q9UKA1 691 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 NUB1Q9Y5A7 615 aa9.87□□□□□ -0.83
PDLIM5-209ENST00000506632 ARHGEF37A1IGU5 675 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ANHXE9PGG2 379 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 H7C4K7 107 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 PPEF2O14830 753 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 XPOTO43592 962 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 XYLBO75191 536 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 F13A1P00488 732 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ZSCAN22P10073 491 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 LAMP2P13473 410 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ATF2P15336 505 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 GBP2P32456 591 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 MCM4P33991 863 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ACOT2P49753 483 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 GUCY2FP51841 1108 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 NTHL1P78549 312 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 KCNA1Q09470 495 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 TDGQ13569 410 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 L1TD1Q5T7N2 865 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 TPGS2Q68CL5 300 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 SLFN12LQ6IEE8 588 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 GRASPQ7Z6J2 395 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 TCEAL8Q8IYN2 117 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 PDILTQ8N807 584 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 FGFBP2Q9BYJ0 223 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 PANK2Q9BZ23 570 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ASB7Q9H672 318 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 KBTBD4Q9NVX7 518 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 DUSP12Q9UNI6 340 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 DERAQ9Y315 318 aa9.86□□□□□ -0.83
PDLIM5-209ENST00000506632 ANO9A1A5B4 782 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CCL16O15467 120 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CUTAO60888 179 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 OAZ2O95190 189 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 NFICP08651 508 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 TYMPP19971 482 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 FSHRP23945 695 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 AVPR2P30518 371 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CASP5P51878 434 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 VCPP55072 806 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 HTR4Q13639 388 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ALCAMQ13740 583 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 PKP1Q13835 747 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 POSTNQ15063 836 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 IER5LQ5T953 404 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ATL3Q6DD88 541 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ADALQ6DHV7 355 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ZNF280DQ6N043 979 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CNNM4Q6P4Q7 775 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 SHC4Q6S5L8 630 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 GET4Q7L5D6 327 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 APPL2Q8NEU8 664 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 PRSS33Q8NF86 280 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 BEST2Q8NFU1 509 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 RSAD2Q8WXG1 361 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ACCSQ96QU6 501 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms