RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C6orf222P0C671 652 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 XBP1P17861 261 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 BAG6P46379 1132 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CNTN2Q02246 1040 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 EDRF1Q3B7T1 1238 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 PDXDC1Q6P996 788 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC60Q8IWA6 550 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TMEM161BQ8NDZ6 487 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ZBTB10Q96DT7 871 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 BHMT2Q9H2M3 363 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 NHEJ1Q9H9Q4 299 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 EFCC1Q9HA90 598 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TUFT1Q9NNX1 390 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 PANK4Q9NVE7 773 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 EHD2Q9NZN4 543 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TBC1D7Q9P0N9 293 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ARHGAP28Q9P2N2 729 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 FBXL5Q9UKA1 691 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TCRBV5S1A1TA0A578 114 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 PRKD3O94806 890 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ZBTB41Q5SVQ8 909 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ARMC3Q5W041 872 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 RNF219Q5W0B1 726 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 OR6P1Q8NGX9 317 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 HDAC7Q8WUI4 952 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF669Q96BR6 464 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CTAGE1Q96RT6 745 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ELAC2Q9BQ52 826 aaKnown RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 SMOC1Q9H4F8 434 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TAS2R14Q9NYV8 317 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 DBR1Q9UK59 544 aaKnown RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 HDAC9Q9UKV0 1011 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 V9GYY5 206 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CNTNAP2Q9UHC6 1331 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 IGKV6-21A0A0C4DH24 114 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 AGPSO00116 658 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 TPM3P06753 285 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 ICAM3P32942 547 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 GTF2A2P52657 109 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 CYP4A11Q02928 519 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 LRRC63Q05C16 580 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 TRADDQ15628 312 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 ERCC6LQ2NKX8 1250 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 C12orf56Q8IXR9 622 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 FAM133AQ8N9E0 248 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 MSANTD4Q8NCY6 345 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 ATXN2LQ8WWM7 1075 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 SCLYQ96I15 445 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 SLF1Q9BQI6 1058 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 HERPUD2Q9BSE4 406 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 SYT17Q9BSW7 474 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 CLIC5Q9NZA1 410 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 NOCTQ9UK39 431 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 DMTF1Q9Y222 760 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 CFAP54Q96N23 3096 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 A0A087X0T9 212 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 EIF3CLB5ME19 914 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 MEN1O00255 615 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 SRGAP2O75044 1071 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 PRPF6O94906 941 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 MT-CO1P00395 513 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 FAM228BP0C875 321 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 GET4Q7L5D6 327 aaPredicted RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 KIF18AQ8NI77 898 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 LPAR1Q92633 364 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 KREMEN1Q96MU8 473 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 EIF3CQ99613 913 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 MIR1-1HGQ9H1L0 117 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 EXOC1Q9NV70 894 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 GGA3Q9NZ52 723 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 SEC63Q9UGP8 760 aaKnown RBP6.42□□□□□ -1.38
SCLT1-207ENST00000506233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.42□□□□□ -1.382e-6■■■■□ 25.1
SCLT1-207ENST00000506233 CORINQ9Y5Q5 1042 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 ATP8B3O60423 1300 aa6.42□□□□□ -1.38
SCLT1-207ENST00000506233 IPO5O00410 1097 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 VNN1O95497 513 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 TPM2P07951 284 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MAPTP10636 758 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MUTP22033 750 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PRKCIP41743 596 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PPM1FP49593 454 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MRPL12P52815 198 aaKnown RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 USP14P54578 494 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PPATQ06203 517 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 PCBP2Q15366 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 SIX1Q15475 284 aaPredicted RBP6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ATP13A4Q4VNC1 1196 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 MARCH8Q5T0T0 291 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 IGF2-ASQ6U949 168 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ADAMTSL4Q6UY14 1074 aa6.41□□□□□ -1.38
SCLT1-207ENST00000506233 ARHGEF19Q8IW93 802 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms