RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
KDM3B-203ENST00000505756 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
KDM3B-203ENST00000505756 PHF7Q9BWX1 381 aaPredicted RBP12.39□□□□□ -0.43
KDM3B-203ENST00000505756 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
KDM3B-203ENST00000505756 MAN1C1Q9NR34 630 aa12.39□□□□□ -0.43
KDM3B-203ENST00000505756 PDCD11Q14690 1871 aaKnown RBP12.39□□□□□ -0.43
KDM3B-203ENST00000505756 TRIP11Q15643 1979 aa12.39□□□□□ -0.43
KDM3B-203ENST00000505756 UBE4BO95155 1302 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 TTC28Q96AY4 2481 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 CUL9Q8IWT3 2517 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 SYN3O14994 580 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 TGM5O43548 720 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 IL18RAPO95256 599 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 NFICP08651 508 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 MTHFRP42898 656 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 TMEM132DQ14C87 1099 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 RARS2Q5T160 578 aaKnown RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 SPATA1Q5VX52 437 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 JADE1Q6IE81 842 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 LILRA6Q6PI73 481 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 C15orf39Q6ZRI6 1047 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 PALB2Q86YC2 1186 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 C12orf76Q8N812 135 aaPredicted RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 BEST2Q8NFU1 509 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 SUSD3Q96L08 255 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 PLEKHA4Q9H4M7 779 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 MTRRQ9UBK8 725 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
KDM3B-203ENST00000505756 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 BACE2Q9Y5Z0 518 aa12.38□□□□□ -0.43
KDM3B-203ENST00000505756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
KDM3B-203ENST00000505756 LOC730098B7Z3J9 87 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 I3L4J1 428 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 EXTL3O43909 919 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 PAX3P23760 479 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 ARMCX5Q6P1M9 558 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 TMC5Q6UXY8 1006 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 CYP26C1Q6V0L0 522 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 NT5DC4Q86YG4 428 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
KDM3B-203ENST00000505756 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 SAAL1Q96ER3 474 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 CBWD1Q9BRT8 395 aa12.37□□□□□ -0.43
KDM3B-203ENST00000505756 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
KDM3B-203ENST00000505756 PLXNA3P51805 1871 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 H7C4K7 107 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 M0QZQ0 153 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 KLRC4O43908 158 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 PAPLNO95428 1278 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 OR1D2P34982 312 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 HOXD13P35453 343 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 GUCY2FP51841 1108 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
KDM3B-203ENST00000505756 PSMD2Q13200 908 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 RAB33AQ14088 237 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 BMT2Q1RMZ1 405 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
KDM3B-203ENST00000505756 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 GPD1LQ8N335 351 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 KREMEN2Q8NCW0 462 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 APPL2Q8NEU8 664 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 PCIF1Q9H4Z3 704 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 POMKQ9H5K3 350 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 ZDHHC7Q9NXF8 308 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 CDH22Q9UJ99 828 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 BDP1A6H8Y1 2624 aa12.36□□□□□ -0.43
KDM3B-203ENST00000505756 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 ANO9A1A5B4 782 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 PIRO00625 290 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 ADAM12O43184 909 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
KDM3B-203ENST00000505756 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
KDM3B-203ENST00000505756 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms