RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 DGKDQ16760 1214 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 DCAF12L1Q5VU92 463 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 MON1BQ7L1V2 547 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 CDT1Q9H211 546 aa18.45■□□□□ 0.54
TRAPPC11-204ENST00000505676 H3BRB1 525 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 HSF2BPO75031 334 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 ATICP31939 592 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 TNFSF9P41273 254 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 RNASE9P60153 205 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 NOMO3P69849 1222 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 CD302Q8IX05 232 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 EXOC4Q96A65 974 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 FAM129AQ9BZQ8 928 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 MTMR12Q9C0I1 747 aa18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
TRAPPC11-204ENST00000505676 H3BQF6 201 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 MAN1A1P33908 653 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 TAP1Q03518 808 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 ACVR2BQ13705 512 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 SPOPLQ6IQ16 392 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 TRAPPC12Q8WVT3 735 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 ALG3Q92685 438 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 LRRC45Q96CN5 670 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 RUFY1Q96T51 708 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 AP1M1Q9BXS5 423 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 IFT122Q9HBG6 1241 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 ACP6Q9NPH0 428 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 MYO1FO00160 1098 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 PHF2O75151 1096 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 CELF2O95319 508 aaKnown RBP18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 CALB1P05937 261 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 MMP3P08254 477 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 ADCYAP1R1P41586 468 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 DMTNQ08495 405 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 ZNF699Q32M78 642 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 CASKIN2Q8WXE0 1202 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 VRTNQ9H8Y1 702 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 AKT3Q9Y243 479 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 CEP83Q9Y592 693 aa18.43■□□□□ 0.54
TRAPPC11-204ENST00000505676 TTLL13PA6NNM8 815 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 THAP12O43422 761 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 P4HA1P13674 534 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 DRG2P55039 364 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 PPFIA1Q13136 1202 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 SPDYCQ5MJ68 293 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 NAA35Q5VZE5 725 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 OR6J1Q8NGC5 347 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 ANAPC7Q9UJX3 599 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 PCDHGC3Q9UN70 934 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 GOLGA8KD6RF30 607 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 PODXLO00592 558 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 CARSP49589 748 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 TFAMQ00059 246 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 CYP1B1Q16678 543 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 ADPGKQ9BRR6 497 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 PARVAQ9NVD7 372 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 ADAM22Q9P0K1 906 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 NFU1Q9UMS0 254 aa18.42■□□□□ 0.54
TRAPPC11-204ENST00000505676 TMEM110-MUSTN1A8MSY1 372 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 POLR3GO15318 223 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 MED7O43513 233 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 EIF4BP23588 611 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 CDH5P33151 784 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 MYL6P60660 151 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 MTMR3Q13615 1198 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 AMHR2Q16671 573 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 PLEKHA7Q6IQ23 1121 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 GSPT2Q8IYD1 628 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 THNSL1Q8IYQ7 743 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 TMEM35BQ8NCS4 154 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 IFT81Q8WYA0 676 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 CYP3A43Q9HB55 503 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 PCYOX1Q9UHG3 505 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 MANSC4A6NHS7 340 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 PSTPIP1O43586 416 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 STAU1O95793 577 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 PAEPP09466 180 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 HSPA9P38646 679 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 FNTAP49354 379 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 IGBP1P78318 339 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 GRIK4Q16099 956 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 DCAF4L1Q3SXM0 396 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 C12orf50Q8NA57 414 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 C1orf131Q8NDD1 294 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 ZNF606Q8WXB4 792 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 FAM212AQ96EL1 285 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 CYFIP2Q96F07 1278 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 ST7Q9NRC1 585 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 CISHQ9NSE2 258 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 PARP2Q9UGN5 583 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 C2CD2Q9Y426 696 aa18.41■□□□□ 0.54
TRAPPC11-204ENST00000505676 A0A087WZ62 844 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 ATMINO43313 823 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 PROSCO94903 275 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 ERLIN2O94905 339 aa18.4■□□□□ 0.54
TRAPPC11-204ENST00000505676 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms