RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 EPHB3P54753 998 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 EPHA5P54756 1037 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ARPP19P56211 112 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 SHC2P98077 582 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-210ENST00000505589 MRPL58Q14197 206 aaKnown RBP10.86□□□□□ -0.67
NEDD9-210ENST00000505589 LPAL2Q16609 132 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 SLC5A9Q2M3M2 681 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 CTXN3Q4LDR2 81 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ARHGAP29Q52LW3 1261 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 HAUS3Q68CZ6 603 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 PADI6Q6TGC4 694 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 VITQ6UXI7 678 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 CACNA2D4Q7Z3S7 1137 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 CATSPER3Q86XQ3 398 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ZSCAN18Q8TBC5 510 aaPredicted RBP10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ACAP3Q96P50 834 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 TCHPQ9BT92 498 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 THG1LQ9NWX6 298 aaKnown RBP10.86□□□□□ -0.67
NEDD9-210ENST00000505589 OBP2AQ9NY56 170 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ASB3Q9Y575 518 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 PCDHGA5Q9Y5G8 931 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 PATJQ8NI35 1801 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 MYBPHLA2RUH7 354 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 HEPACAM2A8MVW5 462 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 CHURC1-FNTBB4DL54 471 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 PODXLO00592 558 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 HRO43593 1189 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 LIG1P18858 919 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 FCARP24071 287 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 RPA1P27694 616 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 GRM5P41594 1212 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 BRCC3P46736 316 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 FNTBP49356 437 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 SATB1Q01826 763 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 FCHO2Q0JRZ9 810 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD9-210ENST00000505589 ARHGAP15Q53QZ3 475 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 XKR4Q5GH76 650 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 WDR5BQ86VZ2 330 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 CAMKK1Q8N5S9 505 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 AIFM3Q96NN9 605 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 MRPL4Q9BYD3 311 aaKnown RBP10.85□□□□□ -0.67
NEDD9-210ENST00000505589 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 C17orf75Q9HAS0 396 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 GPRC5CQ9NQ84 441 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 ORC3Q9UBD5 711 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-210ENST00000505589 CACNG4Q9UBN1 327 aa10.85□□□□□ -0.67
NEDD9-210ENST00000505589 DOCK6Q96HP0 2047 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 SHISA7A6NL88 538 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 PFKFB2O60825 505 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 AKAP3O75969 853 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 SPATA31C1P0DKV0 1188 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 MYL4P12829 197 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 CPB1P15086 417 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 KCNE1P15382 129 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 WEE1P30291 646 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 SCRN1Q12765 414 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 TWF1Q12792 350 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 GLRA4Q5JXX5 417 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 USP37Q86T82 979 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 ITIH5Q86UX2 942 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 CCDC26Q8TAB7 109 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 TCEAL4Q96EI5 215 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 MTMR9Q96QG7 549 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 RAB34Q9BZG1 259 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 CCDC113Q9H0I3 377 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 HSFX1Q9UBD0 423 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 FBXL5Q9UKA1 691 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 ACACBO00763 2458 aa10.84□□□□□ -0.67
NEDD9-210ENST00000505589 GPR179Q6PRD1 2367 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 ZFHX4Q86UP3 3567 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 XPOTO43592 962 aaKnown RBP10.83□□□□□ -0.68
NEDD9-210ENST00000505589 RHOBTB1O94844 696 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 MCF2P10911 925 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 PMLP29590 882 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 MCM4P33991 863 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 VIPR2P41587 438 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 YWHAHQ04917 246 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-210ENST00000505589 DMP1Q13316 513 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-210ENST00000505589 KYAT1Q16773 422 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 DAB2IPQ5VWQ8 1189 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 FAM160A2Q8N612 972 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-210ENST00000505589 GAB3Q8WWW8 586 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 DDX12PQ92771 950 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
NEDD9-210ENST00000505589 ARRDC1-AS1Q9H2J1 176 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 SLC8A2Q9UPR5 921 aa10.83□□□□□ -0.68
NEDD9-210ENST00000505589 EPG5Q9HCE0 2579 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 CCDC169A6NNP5 214 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 SPECC1L-ADORA2AF8WAN1 911 aa10.82□□□□□ -0.68
NEDD9-210ENST00000505589 K7ESF4 209 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms