RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SMARCAL1Q9NZC9 954 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 STRIP2Q9ULQ0 834 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
NFKB1-205ENST00000505458 GLI1P08151 1106 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 CYP1B1Q16678 543 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 DCAF4L1Q3SXM0 396 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 ADPGKQ9BRR6 497 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 PCYOX1Q9UHG3 505 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 NDC80O14777 642 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 PAEPP09466 180 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 CYP2C8P10632 490 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
NFKB1-205ENST00000505458 NOMO3P69849 1222 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 DGKDQ16760 1214 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 MON1BQ7L1V2 547 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 LRRC71Q8N4P6 559 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 HDAC7Q8WUI4 952 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 BRI3BPQ8WY22 251 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 NLRP4Q96MN2 994 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 PI4K2AQ9BTU6 479 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 MIS12Q9H081 205 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
NFKB1-205ENST00000505458 THAP12O43422 761 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 PEX10O60683 326 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 INSRRP14616 1297 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 PEX5P50542 639 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 GRK7Q8WTQ7 553 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 CASKIN2Q8WXE0 1202 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 DERAQ9Y315 318 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 CDH5P33151 784 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 DR1Q01658 176 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 HLTFQ14527 1009 aaKnown RBP eCLIP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 SH3GL2Q99962 352 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 CDT1Q9H211 546 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 GOLPH3Q9H4A6 298 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 IP6K2Q9UHH9 426 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 ANAPC7Q9UJX3 599 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 POLR3GO15318 223 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 PROSCO94903 275 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 MYBL2P10244 700 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 PLEKHA7Q6IQ23 1121 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 ZNF771Q7L3S4 317 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 OR5B17Q8NGF7 314 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 SLCO2A1Q92959 643 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 TINF2Q9BSI4 451 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 APOBEC3GQ9HC16 384 aaKnown RBP12.08□□□□□ -0.48
NFKB1-205ENST00000505458 NUB1Q9Y5A7 615 aa12.08□□□□□ -0.48
NFKB1-205ENST00000505458 PTPRJQ12913 1337 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 ANK1P16157 1881 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 H3BQF6 201 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 ZMYND10O75800 440 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 DRP2Q13474 957 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 CEP128Q6ZU80 1094 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 VPS18Q9P253 973 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 WDR35Q9P2L0 1181 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 NFU1Q9UMS0 254 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 RALGAPA2Q2PPJ7 1873 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 RNF40O75150 1001 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 NAA35Q5VZE5 725 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 AP1M1Q9BXS5 423 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 DDX47Q9H0S4 455 aaKnown RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 ITGA11Q9UKX5 1188 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 STILQ15468 1287 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 DCAF12L1Q5VU92 463 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 MTHFD1LQ6UB35 978 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 RHOT1Q8IXI2 618 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 MTMR12Q9C0I1 747 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 ZNF408Q9H9D4 720 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 MTRF1LQ9UGC7 380 aaKnown RBP12.07□□□□□ -0.48
NFKB1-205ENST00000505458 KIAA1257Q9ULG3 409 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 AKT3Q9Y243 479 aa12.07□□□□□ -0.48
NFKB1-205ENST00000505458 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
NFKB1-205ENST00000505458 MANSC4A6NHS7 340 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-205ENST00000505458 TMEM110-MUSTN1A8MSY1 372 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms