RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TUBA3CQ13748 450 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 SLC4A8Q2Y0W8 1093 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 DGKKQ5KSL6 1271 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 DNTTIP2Q5QJE6 756 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 TTC22Q5TAA0 569 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 UTP14CQ5TAP6 766 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 JAKMIP3Q5VZ66 844 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 EEF1DP3Q658K8 133 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 TUBA3EQ6PEY2 450 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 CD109Q6YHK3 1445 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 CCDC103Q8IW40 242 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 FUKQ8N0W3 1084 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 PDILTQ8N807 584 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 IL17REQ8NFR9 667 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 ZNF483Q8TF39 744 aaPredicted RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 CCT6BQ92526 530 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 TRIM63Q969Q1 353 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 TMEM169Q96HH4 297 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 PLEKHF1Q96S99 279 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 MMP19Q99542 508 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 GTPBP4Q9BZE4 634 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 TSPY26PQ9H489 355 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 IPPKQ9H8X2 491 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 AGO4Q9HCK5 861 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 GPRC5CQ9NQ84 441 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.76□□□□□ -1.65
RFC1-208ENST00000504849 USP36Q9P275 1121 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 IFT172Q9UG01 1749 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 LRCH1Q9Y2L9 728 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 ZDHHC9Q9Y397 364 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 KIF1BO60333 1816 aa4.76□□□□□ -1.65
RFC1-208ENST00000504849 ZC3H13Q5T200 1668 aaKnown RBP4.76□□□□□ -1.65
RFC1-208ENST00000504849 COL3A1P02461 1466 aaPredicted RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 ABCC4O15439 1325 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 CDC42BPGQ6DT37 1551 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 POGZQ7Z3K3 1410 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 GOLIM4O00461 696 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 RAMP2O60895 175 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 DTNBO60941 627 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 HMMRO75330 724 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 PLS3P13797 630 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 CD40P25942 277 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 GRK3P35626 688 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 MTNR1BP49286 362 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 POU5F1Q01860 360 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 KIAA0753Q2KHM9 967 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 COLEC12Q5KU26 742 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 PAPD7Q5XG87 772 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 TTLL5Q6EMB2 1281 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 MZT2AQ6P582 158 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 LVRNQ6Q4G3 990 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 LDHAL6AQ6ZMR3 332 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 PTRH1Q86Y79 214 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 DCP2Q8IU60 420 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 RPAP2Q8IXW5 612 aaPredicted RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 CMIPQ8IY22 773 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 KIAA0319LQ8IZA0 1049 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 CISD2Q8N5K1 135 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 RCBTB1Q8NDN9 531 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 ZNF764Q96H86 408 aaPredicted RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 CDK5RAP3Q96JB5 506 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 LMF1Q96S06 567 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 CCDC94Q9BW85 323 aaPredicted RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 WDR12Q9GZL7 423 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 NUP62CLQ9H1M0 184 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 CATSPERZQ9NTU4 200 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 LMBRD1Q9NUN5 540 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 DNAJC28Q9NX36 388 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 TMEFF2Q9UIK5 374 aaPredicted RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 CBLCQ9ULV8 474 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 WASF3Q9UPY6 502 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 GPR45Q9Y5Y3 372 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 SLC4A7Q9Y6M7 1214 aa4.75□□□□□ -1.65
RFC1-208ENST00000504849 ZCCHC11Q5TAX3 1644 aaKnown RBP4.75□□□□□ -1.65
RFC1-208ENST00000504849 FRMPD1Q5SYB0 1578 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 TULP4Q9NRJ4 1543 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 GOLGA6L6A8MZA4 724 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 ZNF561-AS1K7EIQ3 104 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 ARNTLO00327 626 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 MYO1BO43795 1136 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 KDM1AO60341 852 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 RNASEH2AO75792 299 aaKnown RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 CYP17A1P05093 508 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 ZBTB48P10074 688 aaPredicted RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 MTHFD2P13995 350 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 ACO1P21399 889 aaKnown RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 IRF9Q00978 393 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 FSCN1Q16658 493 aaKnown RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 TAF3Q5VWG9 929 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 USP45Q70EL2 814 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 CPNE8Q86YQ8 564 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 SLC41A1Q8IVJ1 513 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 DRC7Q8IY82 874 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 GRAMD1CQ8IYS0 662 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 PRR18Q8N4B5 295 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 AFAP1Q8N556 730 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms