RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 UBE3CQ15386 1083 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC58Q4VC31 144 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TWF2Q6IBS0 349 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 INTS5Q6P9B9 1019 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LZTR1Q8N653 840 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 WDR60Q8WVS4 1066 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SYMPKQ92797 1274 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TMA16Q96EY4 203 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ADAM33Q9BZ11 813 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NYXQ9GZU5 481 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CSRNP2Q9H175 543 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 WNT5BQ9H1J7 359 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KCTD10Q9H3F6 313 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 EHMT1Q9H9B1 1298 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FANCFQ9NPI8 374 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 MRGBPQ9NV56 204 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 IL1RAPL1Q9NZN1 696 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FRMPD2Q68DX3 1309 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP2D7A0A087X1C5 515 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SMCO2A6NFE2 343 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 A6NL46 340 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 E9PBE3 544 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PRKAB2O43741 272 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 STX10O60499 249 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CTNND1O60716 968 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRN2O75325 713 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FLOT1O75955 427 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 HEXIM1O94992 359 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 HOXB7P09629 217 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 DLATP10515 647 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CD53P19397 219 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 RASA1P20936 1047 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CMA1P23946 247 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CXCR2P25025 360 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 L1CAMP32004 1257 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 RPL9P32969 192 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC1A4P43007 532 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CBX5P45973 191 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CLCN4P51793 760 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBB4BP68371 445 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 IRX4P78413 519 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 MRPS9P82933 396 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FUT2Q10981 343 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TAF11Q15544 211 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SMAD1Q15797 465 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CALCRLQ16602 461 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PHKG1Q16816 387 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ANO4Q32M45 955 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SCYL2Q6P3W7 929 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC62Q6P9F0 684 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TBC1D1Q86TI0 1168 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NLRP10Q86W26 655 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 BBS5Q8N3I7 341 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PPM1KQ8N3J5 372 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FANCBQ8NB91 859 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SUPT20HQ8NEM7 779 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SSH3Q8TE77 659 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NLRP7Q8WX94 980 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PRPF18Q99633 342 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LSG1Q9H089 658 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 GREM2Q9H772 168 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL14Q9P2G3 628 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SUCLA2Q9P2R7 463 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NARFQ9UHQ1 456 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC12A6Q9UHW9 1150 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PAIP2BQ9ULR5 123 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PXDNLA1KZ92 1463 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF623O75123 536 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GUCY1B2O75343 617 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NDUFS6O75380 124 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 FKBP9O95302 570 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MOCS3O95396 460 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 IGKV5-2P06315 115 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ATP2A2P16615 1042 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TNNI1P19237 187 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 HIBADHP31937 336 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 STAT1P42224 750 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MTHFRP42898 656 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 COPB1P53618 953 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PPP2R2AP63151 447 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SMARCB1Q12824 385 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CDC20Q12834 499 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 EPHA7Q15375 998 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SGCAQ16586 387 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DALRD3Q5D0E6 543 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ARMC4Q5T2S8 1044 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 FYB2Q5VWT5 728 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RESP18Q5W5W9 173 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NXNQ6DKJ4 435 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ATG9AQ7Z3C6 839 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 USP37Q86T82 979 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC84Q86UT8 332 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TSPYL5Q86VY4 417 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 AMIGO3Q86WK7 504 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CLVS1Q8IUQ0 354 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KBTBD2Q8IY47 623 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 LRRC47Q8N1G4 583 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TPCN2Q8NHX9 752 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 FNDC8Q8TC99 324 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms