RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RINT1Q6NUQ1 792 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 TAS1R3Q7RTX0 852 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 CD302Q8IX05 232 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ELMOD1Q8N336 334 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SYT2Q8N9I0 419 aaPredicted RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ITFG1Q8TB96 612 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 HASPINQ8TF76 798 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 RABGGTAQ92696 567 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SMARCD2Q92925 531 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SECISBP2LQ93073 1101 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 RMDN1Q96DB5 314 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ZMAT2Q96NC0 199 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 CHRDQ9H2X0 955 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ZFP14Q9HCL3 533 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 KMT5AQ9NQR1 393 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 DDX19AQ9NUU7 478 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 OBP2AQ9NY56 170 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 CACNG4Q9UBN1 327 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PCDHB8Q9UN66 801 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 KIF3AQ9Y496 699 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ASB3Q9Y575 518 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 INSL5Q9Y5Q6 135 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ANK1P16157 1881 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 EP300Q09472 2414 aaPredicted RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TSC2P49815 1807 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TTC26A0AVF1 554 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ARNTLO00327 626 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PRRG1O14668 218 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 XPOTO43592 962 aaKnown RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 FGF19O95750 216 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PIGRP01833 764 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 CLTAP09496 248 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TDGF1P13385 188 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PLS3P13797 630 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TYMPP19971 482 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 HOXA6P31267 233 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 BRCC3P46736 316 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 NTHL1P78549 312 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 FCHO2Q0JRZ9 810 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SMARCB1Q12824 385 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 STRN3Q13033 797 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PTGDRQ13258 359 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 GPR17Q13304 367 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 MYBPC2Q14324 1141 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF174Q15697 407 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC5A9Q2M3M2 681 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC10A6Q3KNW5 377 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 RILPL1Q5EBL4 403 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 GLRA4Q5JXX5 417 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SPECC1Q5M775 1068 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 CYP4A22Q5TCH4 519 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TANGO2Q6ICL3 276 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 POTEHQ6S545 545 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PDZD4Q76G19 769 aaPredicted RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 DGLUCYQ7Z3D6 616 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 MFSD6LQ8IWD5 586 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SYNPOQ8N3V7 929 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 CELF5Q8N6W0 485 aaKnown RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 CEP120Q8N960 986 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TMEM161BQ8NDZ6 487 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 KCNG4Q8TDN1 519 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SNX29Q8TEQ0 813 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ATRIPQ8WXE1 791 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 DDX12PQ92771 950 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 AK8Q96MA6 479 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF512Q96ME7 567 aaPredicted RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 KIFC3Q9BVG8 833 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 TRMT61BQ9BVS5 477 aaKnown RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF334Q9HCZ1 680 aaPredicted RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 SPATA6Q9NWH7 488 aaPredicted RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 HCFC1R1Q9NWW0 138 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 PPP4R2Q9NY27 417 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 LARSQ9P2J5 1176 aaKnown RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 FBXL5Q9UKA1 691 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 ODF2LQ9ULJ1 636 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 UBQLN1Q9UMX0 589 aaKnown RBP6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 POLIQ9UNA4 740 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 NUB1Q9Y5A7 615 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 R4GN57 208 aa6.67□□□□□ -1.34
LSM3P4-201ENST00000502948 DMXL1Q9Y485 3027 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CCDC163A0A0D9SF12 145 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 OR6C75A6NL08 312 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CCDC169A6NNP5 214 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 E9PMD0 336 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CHADO15335 359 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 CLDN3O15551 220 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 FAM189A1O60320 539 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 HIP1RO75146 1068 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MOSPD3O75425 235 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MYBP10242 640 aa6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 MAPTP10636 758 aaKnown RBP6.66□□□□□ -1.34
LSM3P4-201ENST00000502948 TGM1P22735 817 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms