RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 SRRM3A6NNA2 597 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 NCAM2O15394 837 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 TSPAN1O60635 241 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 GAS7O60861 476 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LRP3O75074 770 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 MOSPD3O75425 235 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 ECI2O75521 394 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 KIF4AO95239 1232 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 TDP2O95551 362 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 RHOP08100 348 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 HNRNPA1P09651 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
GYPB-202ENST00000502664 RHOQP17081 205 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 GJA1P17302 382 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 ADD1P35611 737 aaKnown RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 CXCL12P48061 93 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LIMK1P53667 647 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 LAMTOR4Q0VGL1 99 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 PSMD5Q16401 504 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 AMHR2Q16671 573 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 RTN1Q16799 776 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 TMEM132AQ24JP5 1023 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 PABPC1LQ4VXU2 614 aaKnown RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 XKR3Q5GH77 459 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 FAM78AQ5JUQ0 283 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 PRSS36Q5K4E3 855 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 AXDND1Q5T1B0 1012 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 FAM171A1Q5VUB5 890 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LRCH2Q5VUJ6 765 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 PKN3Q6P5Z2 889 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 TXNDC11Q6PKC3 985 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LRSAM1Q6UWE0 723 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 VITQ6UXI7 678 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 MIER3Q7Z3K6 550 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 KBTBD6Q86V97 674 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 SGMS1Q86VZ5 419 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 TTC8Q8TAM2 541 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 RSPH1Q8WYR4 309 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 GTPBP3Q969Y2 492 aaKnown RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 RSPRY1Q96DX4 576 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 CCDC136Q96JN2 1154 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 NELL2Q99435 816 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 COLEC11Q9BWP8 271 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LSM14BQ9BX40 385 aaKnown RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 TEKT3Q9BXF9 490 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 INO80BQ9C086 356 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 ZMYND12Q9H0C1 365 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 ZNF334Q9HCZ1 680 aaPredicted RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.66□□□□□ -1.53e-6■■□□□ 13.8
GYPB-202ENST00000502664 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 MRPS23Q9Y3D9 190 aaKnown RBP5.66□□□□□ -1.5
GYPB-202ENST00000502664 GTF3C3Q9Y5Q9 886 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 LOC400499M0QZD8 3231 aa5.66□□□□□ -1.5
GYPB-202ENST00000502664 CYSRT1A8MQ03 144 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 I3L4J1 428 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 TAF4O00268 1085 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ARNTLO00327 626 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 PTGESO14684 152 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 EXTL3O43909 919 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 TADA2AO75478 443 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 C1RP00736 705 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ZNF806P0C7X5 589 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ARF4P18085 180 aaPredicted RBP5.65□□□□□ -1.5
GYPB-202ENST00000502664 GDI1P31150 447 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 HOXA9P31269 272 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 OR1D2P34982 312 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 VIPR2P41587 438 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 PTGIRP43119 386 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 DNM2P50570 870 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 CCR3P51677 355 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 RAB33AQ14088 237 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 HSP90AA2PQ14568 343 aaPredicted RBP5.65□□□□□ -1.5
GYPB-202ENST00000502664 NECTIN1Q15223 517 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 NAB2Q15742 525 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 PFKFB3Q16875 520 aaPredicted RBP5.65□□□□□ -1.5
GYPB-202ENST00000502664 ADCK5Q3MIX3 580 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 LIN9Q5TKA1 542 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 CREB3L3Q68CJ9 461 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ELMSAN1Q6PJG2 1045 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 CD300LGQ6UXG3 332 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 PRICKLE2Q7Z3G6 844 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 SRGAP1Q7Z6B7 1085 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 LONP2Q86WA8 852 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
GYPB-202ENST00000502664 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 RNF149Q8NC42 400 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 PIK3R5Q8WYR1 880 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 GATA6Q92908 595 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ELSPBP1Q96BH3 223 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 ASB16Q96NS5 453 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 RIT2Q99578 217 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 MTA3Q9BTC8 594 aa5.65□□□□□ -1.5
GYPB-202ENST00000502664 LSG1Q9H089 658 aaKnown RBP5.65□□□□□ -1.5
GYPB-202ENST00000502664 DHX33Q9H6R0 707 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms