RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 NELL2Q99435 816 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 TCHPQ9BT92 498 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 BCO2Q9BYV7 579 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 BHMT2Q9H2M3 363 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 C17orf75Q9HAS0 396 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 CACNG4Q9UBN1 327 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 KIAA1024Q9UPX6 916 aa12.21□□□□□ -0.45
UBE2D3-211ENST00000502404 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 H7C4K7 107 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 LAD1O00515 517 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 NCAM2O15394 837 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 GRM5P41594 1212 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 MAGEA9P43362 315 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 GPC5P78333 572 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 NAB2Q15742 525 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 UPP1Q16831 310 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 SLC44A4Q53GD3 710 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 PARM1Q6UWI2 310 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 CCDC83Q8IWF9 413 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 PJA1Q8NG27 643 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 PPP1R10Q96QC0 940 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 MRPL4Q9BYD3 311 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 MRPS23Q9Y3D9 190 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 CDY1Q9Y6F8 540 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
UBE2D3-211ENST00000502404 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 PRRG1O14668 218 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 ZNF197O14709 1029 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 LRG1P02750 347 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 PTPN2P17706 415 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 CLCNKBP51801 687 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 PEX3P56589 373 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 NTHL1P78549 312 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 MLF2Q15773 248 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 NT5DC1Q5TFE4 455 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 SNX29Q8TEQ0 813 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 FGF14Q92915 247 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 HINFPQ9BQA5 517 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 TIPINQ9BVW5 301 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 KMT5AQ9NQR1 393 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 NUB1Q9Y5A7 615 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 USP34Q70CQ2 3546 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 CFAP54Q96N23 3096 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
UBE2D3-211ENST00000502404 SYN3O14994 580 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ADAM12O43184 909 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ECI2O75521 394 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 SP9P0CG40 484 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 MCF2P10911 925 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 NPTX2P47972 431 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 RPIAP49247 311 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 SMTNP53814 917 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 STRN3Q13033 797 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 APPL2Q8NEU8 664 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ITFG1Q8TB96 612 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ACO2Q99798 780 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 KIFC3Q9BVG8 833 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 AVENQ9NQS1 362 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 SPATA6Q9NWH7 488 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 DLGAP2Q9P1A6 1054 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 DNMT3BQ9UBC3 853 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 R4GN57 208 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
UBE2D3-211ENST00000502404 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
UBE2D3-211ENST00000502404 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
UBE2D3-211ENST00000502404 H0YCG3 227 aa12.17□□□□□ -0.46
UBE2D3-211ENST00000502404 PODXLO00592 558 aa12.17□□□□□ -0.46
UBE2D3-211ENST00000502404 KINO60870 393 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-211ENST00000502404 MICAL2O94851 1124 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms