RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SNRPFP62306 86 aaKnown RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SP4Q02446 784 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SLC39A4Q6P5W5 647 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SPATA21Q7Z572 469 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 FITM2Q8N6M3 262 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 TAS1R2Q8TE23 839 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 C1orf54Q8WWF1 131 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 CKAP2Q8WWK9 683 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SHC3Q92529 594 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 DHX38Q92620 1227 aaKnown RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SERPINB12Q96P63 405 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 WRNIP1Q96S55 665 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 MOV10L1Q9BXT6 1211 aaKnown RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 NOP53Q9NZM5 478 aaKnown RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 GABBR1Q9UBS5 961 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 ARL2BPQ9Y2Y0 163 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 VWA5AO00534 786 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 HGSO14964 777 aaPredicted RBP17.45■□□□□ 0.38
COL6A1-206ENST00000498614 MTA2O94776 668 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 CALCAP01258 141 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 SNX1Q13596 522 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 MOB2Q70IA6 237 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 NLRX1Q86UT6 975 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 HELQQ8TDG4 1101 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 CEP170P1Q96L14 293 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 ZNF570Q96NI8 536 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 NUP85Q9BW27 656 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
COL6A1-206ENST00000498614 IQCA1LA6NCM1 817 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 PMM2O15305 246 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 CLDN3O15551 220 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 ZNF862O60290 1169 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 DIAPH2O60879 1101 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 NEBLO76041 1014 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 CYP11B1P15538 503 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 KRT17Q04695 432 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 C12orf50Q8NA57 414 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-206ENST00000498614 ZNF564Q8TBZ8 553 aaPredicted RBP17.44■□□□□ 0.38
COL6A1-206ENST00000498614 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 ZNF653Q96CK0 615 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 TMEM8AQ9HCN3 771 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 ARHGEF3Q9NR81 526 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 PRKAG3Q9UGI9 489 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 ZNFX1Q9P2E3 1918 aaKnown RBP17.44■□□□□ 0.38
COL6A1-206ENST00000498614 GZMAP12544 262 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 CGB2Q6NT52 195 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 RHBDF2Q6PJF5 856 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 SLC17A8Q8NDX2 589 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 NT5C1BQ96P26 610 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 LRRC19Q9H756 370 aa17.44■□□□□ 0.38
COL6A1-206ENST00000498614 DOCK5Q9H7D0 1870 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 CCDC189A1A4V9 331 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 SSC5DA1L4H1 1573 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 SKAP2O75563 359 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-206ENST00000498614 NR3C2P08235 984 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 ASRGL1Q7L266 308 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 ERICH1Q86X53 443 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 CYP4X1Q8N118 509 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 GBP7Q8N8V2 638 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-206ENST00000498614 FBXL13Q8NEE6 735 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 RXFP1Q9HBX9 757 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 RAB20Q9NX57 234 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 WHRNQ9P202 907 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 ASIC3Q9UHC3 531 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 USP20Q9Y2K6 914 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 BRAFP15056 766 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 CCND1P24385 295 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 CCND2P30279 289 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 GPC3P51654 580 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 RWDD2BP57060 319 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 MGAT5Q09328 741 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 KYNUQ16719 465 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 SEPT14Q6ZU15 432 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 BZW1Q7L1Q6 419 aaKnown RBP17.43■□□□□ 0.38
COL6A1-206ENST00000498614 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 PSPC1Q8WXF1 523 aaKnown RBP17.43■□□□□ 0.38
COL6A1-206ENST00000498614 PWWP2AQ96N64 755 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 TRIM6Q9C030 488 aaPredicted RBP17.43■□□□□ 0.38
COL6A1-206ENST00000498614 COQ4Q9Y3A0 265 aa17.43■□□□□ 0.38
COL6A1-206ENST00000498614 KIAA1217Q5T5P2 1943 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 O00370 1275 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CDC25CP30307 473 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 MSH2P43246 934 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CDR2Q01850 454 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CYP24A1Q07973 514 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 TRIP13Q15645 432 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 SWSAP1Q6NVH7 229 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 SV2AQ7L0J3 742 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms