RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 RBAKQ9NYW8 714 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 UBE4BO95155 1302 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 UNC80Q8N2C7 3258 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 ZNF233A6NK53 670 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 H7C4K7 107 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 CLIC2O15247 247 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 TGFB1I1O43294 461 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 TGM5O43548 720 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 OR1D2P34982 312 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-213ENST00000498495 BMT2Q1RMZ1 405 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 LILRA6Q6PI73 481 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 TMEM130Q8N3G9 435 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 APPL2Q8NEU8 664 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
HSPG2-213ENST00000498495 SUSD6Q92537 303 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 SUSD3Q96L08 255 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
HSPG2-213ENST00000498495 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 SFXN1Q9H9B4 322 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
HSPG2-213ENST00000498495 MTRRQ9UBK8 725 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
HSPG2-213ENST00000498495 PIRO00625 290 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 PAX3P23760 479 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 MTHFRP42898 656 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
HSPG2-213ENST00000498495 DPYDQ12882 1025 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 RAB33AQ14088 237 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 SURF1Q15526 300 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 VARS2Q5ST30 1063 aaKnown RBP13.86□□□□□ -0.19
HSPG2-213ENST00000498495 C9orf57Q5W0N0 161 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-213ENST00000498495 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 KREMEN2Q8NCW0 462 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 PHF7Q9BWX1 381 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-213ENST00000498495 AGPAT3Q9NRZ7 376 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 CDY1Q9Y6F8 540 aa13.86□□□□□ -0.19
HSPG2-213ENST00000498495 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 CCDC195A0A1B0GUA6 201 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 M0QZQ0 153 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 ADAM12O43184 909 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 KIF20AO95235 890 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 LILRA4P59901 499 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 ZP2Q05996 745 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 CTXN3Q4LDR2 81 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 USP37Q86T82 979 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 XXYLT1Q8NBI6 393 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 GOLGA5Q8TBA6 731 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 RPGRIP1Q96KN7 1286 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 PDE11AQ9HCR9 933 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 CD320Q9NPF0 282 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
HSPG2-213ENST00000498495 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
HSPG2-213ENST00000498495 XIRP2A4UGR9 3374 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 ANO9A1A5B4 782 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 PPEF2O14830 753 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 CYP2J2P51589 502 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 ARPP19P56211 112 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 WNT7BP56706 349 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 YWHAHQ04917 246 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 FAM160A1Q05DH4 1040 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 KCNB1Q14721 858 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 LIN9Q5TKA1 542 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 ZNF280DQ6N043 979 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 RSPO2Q6UXX9 243 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 CYP26C1Q6V0L0 522 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 C15orf39Q6ZRI6 1047 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 CBWD2Q8IUF1 395 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 ENGASEQ8NFI3 743 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 CMASQ8NFW8 434 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 SENP8Q96LD8 212 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 PIDD1Q9HB75 910 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 CDH22Q9UJ99 828 aa13.84□□□□□ -0.19
HSPG2-213ENST00000498495 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
HSPG2-213ENST00000498495 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms