RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 E2F4Q16254 413 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
NUP50-219ENST00000497960 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
NUP50-219ENST00000497960 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
NUP50-219ENST00000497960 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 STRA6Q9BX79 667 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 TECTAO75443 2155 aa16.65■□□□□ 0.26
NUP50-219ENST00000497960 VWA8A3KMH1 1905 aa16.64■□□□□ 0.26
NUP50-219ENST00000497960 MTCL1Q9Y4B5 1905 aaKnown RBP16.64■□□□□ 0.26
NUP50-219ENST00000497960 TISP43B9A030 160 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 PAPLNO95428 1278 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 C8AP07357 584 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 ADRB2P07550 413 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 HNRNPA1P09651 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
NUP50-219ENST00000497960 SYKP43405 635 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 ACOT2P49753 483 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
NUP50-219ENST00000497960 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 JADE1Q6IE81 842 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 CEP57L1Q8IYX8 460 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 ASB7Q9H672 318 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 MAGEF1Q9HAY2 307 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 DERAQ9Y315 318 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 CLUHO75153 1309 aa16.64■□□□□ 0.25
NUP50-219ENST00000497960 TMEM221A6NGB7 291 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 M0R296 226 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 XYLBO75191 536 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
NUP50-219ENST00000497960 NDUFA8P51970 172 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 ASIC1P78348 528 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 SIGLEC14Q08ET2 396 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 KCNA1Q09470 495 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 CTXN3Q4LDR2 81 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 SPATA1Q5VX52 437 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 SLC8B1Q6J4K2 584 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 RSPO2Q6UXX9 243 aaPredicted RBP16.63■□□□□ 0.25
NUP50-219ENST00000497960 CLEC17AQ6ZS10 378 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 RTL10Q7L3V2 364 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 SLC7A14Q8TBB6 771 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 SORCS3Q9UPU3 1222 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
NUP50-219ENST00000497960 ADSSP30520 456 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 HOXA9P31269 272 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 ELF1P32519 619 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 GUCY2FP51841 1108 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 CASP5P51878 434 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 ARPP19P56211 112 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 DSTYKQ6XUX3 929 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 UBALD2Q8IYN6 164 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 ZNF461Q8TAF7 563 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 MFSD14AQ96MC6 490 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
NUP50-219ENST00000497960 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 C2orf16Q68DN1 1984 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 FAM237AA0A1B0GTK4 181 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 M0QZQ0 153 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 CCL16O15467 120 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 IL18RAPO95256 599 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 LDHAP00338 332 aaKnown RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 ASGR2P07307 311 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 NFICP08651 508 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 GARTP22102 1010 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 PAX3P23760 479 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 UBE2HP62256 183 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 ROR1Q01973 937 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 MRPL58Q14197 206 aaKnown RBP16.61■□□□□ 0.25
NUP50-219ENST00000497960 CNNM4Q6P4Q7 775 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 USP37Q86T82 979 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 PBXIP1Q96AQ6 731 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 FAM213AQ9BRX8 229 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.254e-8■■■■■ 51.6
NUP50-219ENST00000497960 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
NUP50-219ENST00000497960 SERTAD1Q9UHV2 236 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms