RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DDX27Q96GQ7 796 aaKnown RBP21.65■■□□□ 1.06
CTSD-206ENST00000497544 ZNF558Q96NG5 402 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 DPP3Q9NY33 737 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 DNAJB4Q9UDY4 337 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 RWDD3Q9Y3V2 267 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 PCDHB12Q9Y5F1 795 aa21.65■■□□□ 1.06
CTSD-206ENST00000497544 CASTOR2A6NHX0 329 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 LRRIQ3A6PVS8 624 aaPredicted RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 IKBKBO14920 756 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 RPL9P32969 192 aaKnown RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 AP3M2P53677 418 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 BCAR1P56945 870 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 DLG4P78352 724 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 SOX4Q06945 474 aaPredicted RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 KCNT2Q6UVM3 1135 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 COLGALT1Q8NBJ5 622 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 CLP1Q92989 425 aaKnown RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 CNOT6LQ96LI5 555 aaKnown RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 UROC1Q96N76 676 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 COLEC11Q9BWP8 271 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 GOLGA2P5Q9HBQ8 144 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 SAMSN1Q9NSI8 373 aaKnown RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 FANCLQ9NW38 375 aa21.64■■□□□ 1.05
CTSD-206ENST00000497544 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
CTSD-206ENST00000497544 COL4A6Q14031 1691 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 TRIOO75962 3097 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 NRP1O14786 923 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 DCXO43602 365 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 STX10O60499 249 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 LPXNO60711 386 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 GALTP07902 379 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 MTIF2P46199 727 aaKnown RBP21.63■■□□□ 1.05
CTSD-206ENST00000497544 SLC11A1P49279 550 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 MARSP56192 900 aaKnown RBP21.63■■□□□ 1.05
CTSD-206ENST00000497544 HSP90AA4PQ58FG1 418 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 DCAF17Q5H9S7 520 aaPredicted RBP21.63■■□□□ 1.05
CTSD-206ENST00000497544 DCLRE1AQ6PJP8 1040 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 HFE2Q6ZVN8 426 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 OR5B17Q8NGF7 314 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 SAMD11Q96NU1 681 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 TGS1Q96RS0 853 aaKnown RBP21.63■■□□□ 1.05
CTSD-206ENST00000497544 CBX8Q9HC52 389 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 TUBGCP4Q9UGJ1 667 aa21.63■■□□□ 1.05
CTSD-206ENST00000497544 C5orf42Q9H799 3197 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 NT5C1B-RDH14C9J2C7 533 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 PHACTR2O75167 634 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 TRIM49P0CI25 452 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 TRIM49CP0CI26 452 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 IL9P15248 144 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 BMPR1AP36894 532 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 GUCY2FP51841 1108 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 CLDN10P78369 228 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 TAP1Q03518 808 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 IRF2BP1Q8IU81 584 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 ZNF516Q92618 1163 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 RABGGTAQ92696 567 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 MTMR12Q9C0I1 747 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 MMRN2Q9H8L6 949 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 CACNG4Q9UBN1 327 aa21.62■■□□□ 1.05
CTSD-206ENST00000497544 PRG3Q9Y2Y8 225 aaPredicted RBP21.62■■□□□ 1.05
CTSD-206ENST00000497544 PTPRJQ12913 1337 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 PODXLO00592 558 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 B4GALT3O60512 393 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 KRT19P08727 400 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 CDK11BP21127 795 aaKnown RBP21.61■■□□□ 1.05
CTSD-206ENST00000497544 LRPAP1P30533 357 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 GTF2H1P32780 548 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 CTNNB1P35222 781 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 PBX3P40426 434 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 CLCNKBP51801 687 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 MCCD1P59942 119 aaPredicted RBP21.61■■□□□ 1.05
CTSD-206ENST00000497544 TPM4P67936 248 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 BIRC3Q13489 604 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 NCAPHQ15003 741 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 IQCB1Q15051 598 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 TRAPPC11Q7Z392 1133 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 DHX40Q8IX18 779 aaKnown RBP21.61■■□□□ 1.05
CTSD-206ENST00000497544 PRSS33Q8NF86 280 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.61■■□□□ 1.05
CTSD-206ENST00000497544 PAAF1Q9BRP4 392 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 UBE2ZQ9H832 354 aaPredicted RBP21.61■■□□□ 1.05
CTSD-206ENST00000497544 SPG21Q9NZD8 308 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 ITGA11Q9UKX5 1188 aa21.61■■□□□ 1.05
CTSD-206ENST00000497544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.61■■□□□ 1.05
CTSD-206ENST00000497544 NLRC5Q86WI3 1866 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 KCNJ18B7U540 433 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 TADA2AO75478 443 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 B3GAT3O94766 335 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 C4BPAP04003 597 aaKnown RBP21.6■■□□□ 1.05
CTSD-206ENST00000497544 ITGB3P05106 788 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 RB1P06400 928 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 EEF1GP26641 437 aaKnown RBP21.6■■□□□ 1.05
CTSD-206ENST00000497544 PPM1AP35813 382 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 GCLMP48507 274 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 ERVK-21P61565 698 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 RBP5P82980 135 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 KCNJ12Q14500 433 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 UPP1Q16831 310 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 C1orf220Q5T0J3 134 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 SV2AQ7L0J3 742 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms