RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 RDM1Q8NG50 284 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 CCDC12Q8WUD4 166 aaPredicted RBP6.18□□□□□ -1.42
UBE3C-208ENST00000497368 GTF3C6Q969F1 213 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 FAM167AQ96KS9 214 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
UBE3C-208ENST00000497368 TCF12Q99081 682 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 FDXACB1Q9BRP7 624 aaPredicted RBP6.18□□□□□ -1.42
UBE3C-208ENST00000497368 RBCK1Q9BYM8 510 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 TMEM117Q9H0C3 514 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 CXCL16Q9H2A7 254 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 TMEM60Q9H2L4 133 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 SMOC2Q9H3U7 446 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 DHX33Q9H6R0 707 aaKnown RBP6.18□□□□□ -1.42
UBE3C-208ENST00000497368 OSGEPQ9NPF4 335 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 C1orf112Q9NSG2 853 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 MARCH5Q9NX47 278 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 DNAJB4Q9UDY4 337 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 PRKAG3Q9UGI9 489 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 MUTYHQ9UIF7 546 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 CD207Q9UJ71 328 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 RWDD3Q9Y3V2 267 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 USP15Q9Y4E8 981 aaPredicted RBP6.18□□□□□ -1.42
UBE3C-208ENST00000497368 MYH11P35749 1972 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 DNAH14Q0VDD8 3507 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 PIEZO1Q92508 2521 aa6.18□□□□□ -1.42
UBE3C-208ENST00000497368 FRYLO94915 3013 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 FANCMQ8IYD8 2048 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 A0A096LPE4 126 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 A0A0U1RQF3 1178 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 A0A1W2PPZ6 126 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 M0QZ92 97 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 EIF1AYO14602 144 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 DCXO43602 365 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 STAG3L1P0CL83 205 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 ESRRAP11474 423 aaPredicted RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 HOXA11P31270 313 aaPredicted RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 SFNP31947 248 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 ARL4DP49703 201 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 NLRP5P59047 1200 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 NONOQ15233 471 aaKnown RBP eCLIP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 HERC4Q5GLZ8 1057 aaPredicted RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 TMEM31Q5JXX7 168 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 PLPP4Q5VZY2 271 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 MCTP2Q6DN12 878 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 KCNT2Q6UVM3 1135 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 TMEM184AQ6ZMB5 413 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 AGMOQ6ZNB7 445 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 MIER3Q7Z3K6 550 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 RBM23Q86U06 439 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 CCNJLQ8IV13 435 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 RNF168Q8IYW5 571 aaPredicted RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 METTL13Q8N6R0 699 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 SMG8Q8ND04 991 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 BICD2Q8TD16 824 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 AUTS2Q8WXX7 1259 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 MRPS27Q92552 414 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 CCDC74AQ96AQ1 378 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 ASIC4Q96FT7 647 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 DMRTB1Q96MA1 342 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 TRAIPQ9BWF2 469 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 C1QTNF1Q9BXJ1 281 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 ZBP1Q9H171 429 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 NRDE2Q9H7Z3 1164 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 TLR9Q9NR96 1032 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 PDRG1Q9NUG6 133 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 AGPAT5Q9NUQ2 364 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 RGL1Q9NZL6 768 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 DDX25Q9UHL0 483 aaKnown RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 AKT3Q9Y243 479 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 CYP46A1Q9Y6A2 500 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 KIF26AQ9ULI4 1882 aaPredicted RBP6.17□□□□□ -1.42
UBE3C-208ENST00000497368 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
UBE3C-208ENST00000497368 CITO14578 2027 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 DENND3A2RUS2 1198 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 C2orf71A6NGG8 1288 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PRR33A8MZF0 331 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 NT5C1B-RDH14C9J2C7 533 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 INPPL1O15357 1258 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 MAGEB2O15479 319 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 CLASP2O75122 1294 aaKnown RBP6.16□□□□□ -1.42
UBE3C-208ENST00000497368 OFD1O75665 1012 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 DDHD2O94830 711 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PDGFBP01127 241 aaPredicted RBP6.16□□□□□ -1.42
UBE3C-208ENST00000497368 LAG3P18627 525 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PSMA5P28066 241 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 MAPK1P28482 360 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 SLC11A1P49279 550 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 NDUFV1P49821 464 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 FGD1P98174 961 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 UBE3AQ05086 875 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 CAPSQ13938 189 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 LETM2Q2VYF4 491 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 LONRF3Q496Y0 759 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 XKR3Q5GH77 459 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PPP4R3AQ6IN85 833 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PRR23CQ6ZRP0 262 aa6.16□□□□□ -1.42
UBE3C-208ENST00000497368 PIK3AP1Q6ZUJ8 805 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms