RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 GPR3P46089 330 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ANTXR2P58335 489 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 KRT85P78386 507 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 NHLH1Q02575 133 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ROM1Q03395 351 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 NOLC1Q14978 699 aaKnown RBP eCLIP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ZNF827Q17R98 1081 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 VMACQ2NL98 169 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 FAM180BQ6P0A1 224 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 LCNL1Q6ZST4 164 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 FRMD7Q6ZUT3 714 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 GPR155Q7Z3F1 870 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ZNF761Q86XN6 746 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 MYLK4Q86YV6 388 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 SPATA5Q8NB90 893 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ZBTB34Q8NCN2 500 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 FAM156AQ8NDB6 213 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 ACRBPQ8NEB7 543 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 CCT6BQ92526 530 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 CDK5RAP3Q96JB5 506 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 CCDC138Q96M89 665 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 PPM1MQ96MI6 270 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 TBCBQ99426 244 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 NELL2Q99435 816 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 KATNBL1Q9H079 304 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 C14orf119Q9NWQ9 140 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 RRN3Q9NYV6 651 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 CROTQ9UKG9 612 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 PCDHGB6Q9Y5F9 930 aa4.32□□□□□ -1.72
EXOSC3-208ENST00000496910 IGSF1Q8N6C5 1336 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A0A6YYJ9 748 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 DBX1A6NMT0 343 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 NUAK1O60285 661 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 PQBP1O60828 265 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TRIM13O60858 407 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 VCAM1P19320 739 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 CAPN3P20807 821 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 APEX1P27695 318 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 GRK6P43250 576 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 SLURP1P55000 103 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ZBED6P86452 979 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 NUCB1Q02818 461 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TRIM25Q14258 630 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 EIF4HQ15056 248 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 LLGL1Q15334 1064 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 PITRM1Q5JRX3 1037 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 FAM26FQ5R3K3 315 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TRIM68Q6AZZ1 485 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 OVCH2Q7RTZ1 564 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 KCNK18Q7Z418 384 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ANKRD23Q86SG2 305 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 LRRC56Q8IYG6 542 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 C7orf31Q8N865 590 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TXNDC5Q8NBS9 432 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 GIMAP8Q8ND71 665 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 OR5AN1Q8NGI8 311 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 PPP1R14CQ8TAE6 165 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ADAMTS17Q8TE56 1095 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 NKD2Q969F2 451 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 AJUBAQ96IF1 538 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TTC14Q96N46 770 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 TUBGCP5Q96RT8 1024 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ACO2Q99798 780 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ISCA1Q9BUE6 129 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 ALG13Q9NP73 1137 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 MKS1Q9NXB0 559 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 NTMQ9P121 344 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 POLHQ9Y253 713 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 LRRFIP2Q9Y608 721 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 PAPPA2Q9BXP8 1791 aa4.31□□□□□ -1.72
EXOSC3-208ENST00000496910 LAMB2P55268 1798 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NRAPQ86VF7 1730 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 WASHC2AQ641Q2 1341 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TRIM75PA6NK02 468 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 H0Y858 1186 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 EYA2O00167 538 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 XPOTO43592 962 aaKnown RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NOBOXO60393 691 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 OPHN1O60890 802 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 H2AFYO75367 372 aaKnown RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 HRGP04196 525 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 PYGLP06737 847 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 CLEC2LP0C7M8 214 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 ENPP1P22413 925 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 CSF2RBP32927 897 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 ETV4P43268 484 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 ADCY2Q08462 1091 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 CNGB1Q14028 1251 aaPredicted RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 PDE1CQ14123 709 aaPredicted RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 PDCD2Q16342 344 aaPredicted RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 PKN1Q16512 942 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 FSCN1Q16658 493 aaKnown RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TXNRD1Q16881 649 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 SPECC1Q5M775 1068 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 WDR45BQ5MNZ6 344 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms