RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 MYBPC2Q14324 1141 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 SNRNP35Q16560 246 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 ANKRD54Q6NXT1 300 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 CD300LGQ6UXG3 332 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 CLEC17AQ6ZS10 378 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 SLC9A9Q8IVB4 645 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 SLC22A17Q8WUG5 538 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 TMEM174Q8WUU8 243 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 ANKRD36BP1Q96IX9 119 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 B3GALT6Q96L58 329 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 ZNF560Q96MR9 790 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 GBP4Q96PP9 640 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 DPP3Q9NY33 737 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 CLEC1BQ9P126 229 aa20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 R3HCC1Q9Y3T6 440 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-213ENST00000496785 EYSQ5T1H1 3165 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 PNPLA4P41247 253 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 KCNQ1P51787 676 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 TFAMQ00059 246 aaKnown RBP20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 DLX2Q07687 328 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 C9orf57Q5W0N0 161 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 CBWD2Q8IUF1 395 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 EFCAB13Q8IY85 973 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 SMRP1Q8NCR6 262 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 VN1R2Q8NFZ6 395 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 LNX1Q8TBB1 728 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 HDAC7Q8WUI4 952 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 FNBP1Q96RU3 617 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 KCTD10Q9H3F6 313 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 TSHZ2Q9NRE2 1034 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 MTRRQ9UBK8 725 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 PCDHB8Q9UN66 801 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 TRAF3IP3Q9Y228 551 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 BACE2Q9Y5Z0 518 aa20.82■□□□□ 0.92
CTDSP1-213ENST00000496785 ANO9A1A5B4 782 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 TNNC2P02585 160 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 BMP1P13497 986 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 TKTP29401 623 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 PPP1R2P41236 205 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 ITIH3Q06033 890 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 ZNF658Q5TYW1 1059 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 CES5AQ6NT32 575 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 PRSS55Q6UWB4 352 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 DSTYKQ6XUX3 929 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 WDR49Q8IV35 697 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 ZSWIM2Q8NEG5 633 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 SPATA20Q8TB22 786 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 OXCT2Q9BYC2 517 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 PLEKHA4Q9H4M7 779 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 PDE11AQ9HCR9 933 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 ITGA11Q9UKX5 1188 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 PCDHA5Q9Y5H7 936 aa20.81■□□□□ 0.92
CTDSP1-213ENST00000496785 ANK1P16157 1881 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 BRWD1Q9NSI6 2320 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 GRXCR2A6NFK2 248 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 GOLGA6L22H0YM25 854 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 M0QZQ0 153 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 PIRO00625 290 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 MBTPS2O43462 519 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 ODC1P11926 461 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 EPCAMP16422 314 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 RPL13P26373 211 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 AARSP49588 968 aaKnown RBP eCLIP20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 TAF6P49848 677 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 GUCY2FP51841 1108 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 STIM1Q13586 685 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 PSMD6Q15008 389 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 CLUL1Q15846 466 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 NFIL3Q16649 462 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 SV2CQ496J9 727 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 ZNF280DQ6N043 979 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 USP37Q86T82 979 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 RDH13Q8NBN7 331 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 SFXN1Q9H9B4 322 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 FRMD4BQ9Y2L6 1034 aa20.8■□□□□ 0.92
CTDSP1-213ENST00000496785 PRUNE2Q8WUY3 3088 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 I3L4J1 428 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 NR3C1P04150 777 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 LILRA4P59901 499 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 RBM10P98175 930 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 CYP24A1Q07973 514 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 DUOXA2Q1HG44 320 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 VARS2Q5ST30 1063 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 LRRC52Q8N7C0 313 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 CLSTN3Q9BQT9 956 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 INTS13Q9NVM9 706 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 DMAC2Q9NW81 257 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 PRKAG3Q9UGI9 489 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 DSEQ9UL01 958 aa20.79■□□□□ 0.92
CTDSP1-213ENST00000496785 TYMPP19971 482 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 RBP5P82980 135 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 YWHAHQ04917 246 aaPredicted RBP20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 SMAD2Q15796 467 aaKnown RBP20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 EDRF1Q3B7T1 1238 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 SYCE2Q6PIF2 218 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 PALB2Q86YC2 1186 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
CTDSP1-213ENST00000496785 ADAMTS19Q8TE59 1207 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms