RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 LINC01599Q8WXQ3 324 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 POP1Q99575 1024 aaKnown RBP16.17■□□□□ 0.18
GAPDH-210ENST00000496049 NUP58Q9BVL2 599 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 KCNH6Q9H252 994 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 IL23AQ9NPF7 189 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 KLK14Q9P0G3 267 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 UBQLN1Q9UMX0 589 aaKnown RBP16.17■□□□□ 0.18
GAPDH-210ENST00000496049 DAAM1Q9Y4D1 1078 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
GAPDH-210ENST00000496049 PTPRZ1P23471 2315 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 COL4A4P53420 1690 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 AMHP03971 560 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 KCNE1P15382 129 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 TRIM21P19474 475 aaKnown RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 RFX1P22670 979 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 ZACNQ401N2 412 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 C1orf220Q5T0J3 134 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 LMBRD2Q68DH5 695 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 TMC6Q7Z403 805 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 NPAS4Q8IUM7 802 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 EFCAB13Q8IY85 973 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 GJD3Q8N144 294 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 LPPQ93052 612 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 LSM14BQ9BX40 385 aaKnown RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 INTS2Q9H0H0 1204 aaKnown RBP16.16■□□□□ 0.18
GAPDH-210ENST00000496049 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 PTPRJQ12913 1337 aa16.16■□□□□ 0.18
GAPDH-210ENST00000496049 ARL5CA6NH57 179 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 ENPP3O14638 875 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.18
GAPDH-210ENST00000496049 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
GAPDH-210ENST00000496049 KCNJ6P48051 423 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 WNT7BP56706 349 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 FAM189BP81408 668 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 GRIK3Q13003 919 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 XKR4Q5GH76 650 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 WDR44Q5JSH3 913 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 TDRD10Q5VZ19 366 aaKnown RBP16.15■□□□□ 0.18
GAPDH-210ENST00000496049 ALKAL1Q6UXT8 129 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 ZNF598Q86UK7 904 aaKnown RBP16.15■□□□□ 0.18
GAPDH-210ENST00000496049 OR5B17Q8NGF7 314 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 FAM81BQ96LP2 452 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 GAD1Q99259 594 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 CRACR2AQ9BSW2 395 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
GAPDH-210ENST00000496049 SMIM28A0A1B0GU29 152 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 HLA-DRAP01903 254 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 C4BPAP04003 597 aaKnown RBP16.14■□□□□ 0.17
GAPDH-210ENST00000496049 THP07101 528 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 KRT19P08727 400 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 CYP3A5P20815 502 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 PBX1P40424 430 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 NCOA4Q13772 614 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 EPC2Q52LR7 807 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 GLRA4Q5JXX5 417 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 TRIM65Q6PJ69 517 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 C15orf39Q6ZRI6 1047 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 OTOP2Q7RTS6 562 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 TRAPPC11Q7Z392 1133 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 RTN4RL1Q86UN2 441 aaPredicted RBP16.14■□□□□ 0.17
GAPDH-210ENST00000496049 ZNF560Q96MR9 790 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 NT5C1BQ96P26 610 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 MRPL9Q9BYD2 267 aaKnown RBP16.14■□□□□ 0.17
GAPDH-210ENST00000496049 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
GAPDH-210ENST00000496049 PLCB1Q9NQ66 1216 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
GAPDH-210ENST00000496049 RAB20Q9NX57 234 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 DPP3Q9NY33 737 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 KANSL3Q9P2N6 904 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 SIK3Q9Y2K2 1263 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 COQ4Q9Y3A0 265 aa16.14■□□□□ 0.17
GAPDH-210ENST00000496049 TDRD15B5MCY1 1934 aaKnown RBP16.13■□□□□ 0.17
GAPDH-210ENST00000496049 INPPL1O15357 1258 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
GAPDH-210ENST00000496049 PTMAP06454 111 aaKnown RBP16.13■□□□□ 0.17
GAPDH-210ENST00000496049 ALADP13716 330 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 PON1P27169 355 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 RBP5P82980 135 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 CACNA2D4Q7Z3S7 1137 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 SPC24Q8NBT2 197 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 ZNF397Q8NF99 534 aaPredicted RBP16.13■□□□□ 0.17
GAPDH-210ENST00000496049 HELQQ8TDG4 1101 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 TAS1R2Q8TE23 839 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 ZNF516Q92618 1163 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 TAF4BQ92750 862 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 ZFP42Q96MM3 310 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 APEX2Q9UBZ4 518 aa16.13■□□□□ 0.17
GAPDH-210ENST00000496049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.12■□□□□ 0.17
GAPDH-210ENST00000496049 FGBP02675 491 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 ITGB3P05106 788 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 P4HA1P13674 534 aa16.12■□□□□ 0.17
GAPDH-210ENST00000496049 ATICP31939 592 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms