RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 TCEAL4Q96EI5 215 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 JPH2Q9BR39 696 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 NUSAP1Q9BXS6 441 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 SLITRK6Q9H5Y7 841 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 DISC1Q9NRI5 854 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 GIT1Q9Y2X7 761 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HES2Q9Y543 173 aa10.69□□□□□ -0.7
SMARCAL1-213ENST00000496037 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 IGLV3-22A0A075B6J6 115 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 IGKV6-21A0A0C4DH24 114 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 CCDC194A0A1B0GVG4 234 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 DCLK1O15075 740 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 HOXA11P31270 313 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 ATXN3P54252 364 aaPredicted RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 IRX4P78413 519 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 TARBP2Q15633 366 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 UGCGQ16739 394 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 PKN3Q6P5Z2 889 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 NOTUMQ6P988 496 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 ELMOD1Q8N336 334 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 TTC8Q8TAM2 541 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 CCDC51Q96ER9 411 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZSWIM3Q96MP5 696 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 EIF2AQ9BY44 585 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 COL4A3BPQ9Y5P4 624 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 CDY1Q9Y6F8 540 aa10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 PDCD11Q14690 1871 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-213ENST00000496037 TDRD15B5MCY1 1934 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 ARHGEF37A1IGU5 675 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 CASTOR2A6NHX0 329 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 ATXN7O15265 892 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 CHMP2AO43633 222 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 KIF4AO95239 1232 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 APBB3O95704 486 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 TUSC3Q13454 348 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 PMS2CLQ68D20 193 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 PPP1R18Q6NYC8 613 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 BLOC1S3Q6QNY0 202 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 PIP4P1Q86T03 277 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 PIGKQ92643 395 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 GTSE1Q9NYZ3 720 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 MTRRQ9UBK8 725 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 CACNG4Q9UBN1 327 aa10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 EVLQ9UI08 416 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZNF462Q96JM2 2506 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 NCANO14594 1321 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 MAFO75444 373 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 SRGAP2CP0DJJ0 459 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CALM1P0DP23 149 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CALM2P0DP24 149 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CALM3P0DP25 149 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 SFNP31947 248 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CCR2P41597 374 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 DHPSP49366 369 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 JAK3P52333 1124 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 FCHO2Q0JRZ9 810 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 GRSF1Q12849 480 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 SEMA3BQ13214 749 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 TUSC1Q2TAM9 212 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 XKR3Q5GH77 459 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CCNI2Q6ZMN8 369 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 NFXL1Q6ZNB6 911 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 LEMD2Q8NC56 503 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 NCOA7Q8NI08 942 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 TMEM209Q96SK2 561 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 PAAF1Q9BRP4 392 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 GPR88Q9GZN0 384 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 GLT8D2Q9H1C3 349 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 NXF3Q9H4D5 531 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 CLMPQ9H6B4 373 aa10.66□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 TMEM150BA6NC51 233 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 CAPN8A6NHC0 703 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 HIP1O00291 1037 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 CAPN9O14815 690 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 MYL4P12829 197 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ENGP17813 658 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 AKAP5P24588 427 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 AXLP30530 894 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ABCG1P45844 678 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms