RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
ACTN4-207ENST00000495553 NEK11Q8NG66 645 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 MYLIPQ8WY64 445 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 GAD1Q99259 594 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 DNAI2Q9GZS0 605 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 INTS13Q9NVM9 706 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 KLK14Q9P0G3 267 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 GCNT4Q9P109 453 aa10.23□□□□□ -0.77
ACTN4-207ENST00000495553 UBQLN1Q9UMX0 589 aaKnown RBP10.23□□□□□ -0.77
ACTN4-207ENST00000495553 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 NRDCO43847 1150 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 ZC3H11AO75152 810 aaKnown RBP eCLIP10.22□□□□□ -0.77
ACTN4-207ENST00000495553 KRT19P08727 400 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 CYP3A5P20815 502 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 RFX1P22670 979 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 PAX3P23760 479 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 PNPLA4P41247 253 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 SCNN1GP51170 649 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 MCCD1P59942 119 aaPredicted RBP10.22□□□□□ -0.77
ACTN4-207ENST00000495553 DLG4P78352 724 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 RBP5P82980 135 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 GRIK3Q13003 919 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 GPM6BQ13491 265 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 PTPROQ16827 1216 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 JADE1Q6IE81 842 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 KCNT2Q6UVM3 1135 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 COLGALT1Q8NBJ5 622 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 TAF4BQ92750 862 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 UROC1Q96N76 676 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 ZNF558Q96NG5 402 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 NAP1L5Q96NT1 182 aaPredicted RBP10.22□□□□□ -0.77
ACTN4-207ENST00000495553 ERGIC2Q96RQ1 377 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
ACTN4-207ENST00000495553 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 CWH43Q9H720 699 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 DPP3Q9NY33 737 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 TTC3P53804 2025 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 MICAL3Q7RTP6 2002 aa10.22□□□□□ -0.77
ACTN4-207ENST00000495553 SMIM28A0A1B0GU29 152 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ARHGEF37A1IGU5 675 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 C5orf67F2Z3F1 127 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 H3BNC9 293 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ALDH2P05091 517 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 NFICP08651 508 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 LINC00271P0C7V0 271 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ATICP31939 592 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 RPL9P32969 192 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 PPM1AP35813 382 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 AFF1P51825 1210 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 BCAR1P56945 870 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 KRT17Q04695 432 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 PPP3CAQ08209 521 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 NCOA4Q13772 614 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 SYCP1Q15431 976 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ZACNQ401N2 412 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 XKR4Q5GH76 650 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ALKAL1Q6UXT8 129 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ENOSF1Q7L5Y1 443 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 APTXQ7Z2E3 356 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 TRAPPC11Q7Z392 1133 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 CACNA2D4Q7Z3S7 1137 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 KLHL23Q8NBE8 558 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ZNF560Q96MR9 790 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 NT5C1BQ96P26 610 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 INTS2Q9H0H0 1204 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 RAB20Q9NX57 234 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 SPG21Q9NZD8 308 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 IMPACTQ9P2X3 320 aa10.21□□□□□ -0.77
ACTN4-207ENST00000495553 PUF60Q9UHX1 559 aaKnown RBP10.21□□□□□ -0.77
ACTN4-207ENST00000495553 ITIH6Q6UXX5 1313 aa10.21□□□□□ -0.78
ACTN4-207ENST00000495553 CITO14578 2027 aa10.21□□□□□ -0.78
ACTN4-207ENST00000495553 INPPL1O15357 1258 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 FGF18O76093 207 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 HLA-DRAP01903 254 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 C4BPAP04003 597 aaKnown RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 GALTP07902 379 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TBXAS1P24557 533 aaPredicted RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 PBX3P40426 434 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 OR1G1P47890 313 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 MFAP3P55082 362 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 GSDMDP57764 484 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 YWHAEP62258 255 aaKnown RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TNNC1P63316 161 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 CCDC173Q0VFZ6 552 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 ADGRE1Q14246 886 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 ZNF699Q32M78 642 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 CBWD6Q4V339 395 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 CBWD3Q5JTY5 395 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 CBWD5Q5RIA9 395 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TDRD10Q5VZ19 366 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms