RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 RAB20Q9NX57 234 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 DUSP10Q9Y6W6 482 aa17.49■□□□□ 0.39
CBX4-204ENST00000495122 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 ZBTB42B2RXF5 422 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 DDX3XO00571 662 aaKnown RBP eCLIP17.48■□□□□ 0.39
CBX4-204ENST00000495122 TOM1L1O75674 476 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 PARNO95453 639 aaKnown RBP17.48■□□□□ 0.39
CBX4-204ENST00000495122 CXCL10P02778 98 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 TNFAIP3P21580 790 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
CBX4-204ENST00000495122 BRD3Q15059 726 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 TEX35Q5T0J7 233 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 GJB7Q6PEY0 223 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 FAM71AQ8IYT1 594 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 LRRN4CLQ8ND94 238 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 PHOSPHO2Q8TCD6 241 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 PRPF31Q8WWY3 499 aaKnown RBP17.48■□□□□ 0.39
CBX4-204ENST00000495122 FAM213AQ9BRX8 229 aa17.48■□□□□ 0.39
CBX4-204ENST00000495122 NBNO60934 754 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 GZMAP12544 262 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 KLRC1P26715 233 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 HADHBP55084 474 aaKnown RBP17.47■□□□□ 0.39
CBX4-204ENST00000495122 LAMTOR4Q0VGL1 99 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 NAA30Q147X3 362 aaPredicted RBP17.47■□□□□ 0.39
CBX4-204ENST00000495122 MAPK6Q16659 721 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 ZACNQ401N2 412 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 CCDC70Q6NSX1 233 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 PPP1R2P3Q6NXS1 205 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 CNKSR3Q6P9H4 555 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 SV2AQ7L0J3 742 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
CBX4-204ENST00000495122 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 CGRRF1Q99675 332 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 AGPAT1Q99943 283 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.47■□□□□ 0.39
CBX4-204ENST00000495122 TFR2Q9UP52 801 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 TRPC6Q9Y210 931 aa17.47■□□□□ 0.39
CBX4-204ENST00000495122 V9GYY5 206 aaPredicted RBP17.47■□□□□ 0.39
CBX4-204ENST00000495122 TARSL2A2RTX5 802 aaKnown RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 GRID2IPA4D2P6 1211 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 CCDC151A5D8V7 595 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 ANKRD62A6NC57 917 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 H3BRB1 525 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 FOXN3O00409 490 aaPredicted RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 CA3P07451 260 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 NAP1L1P55209 391 aaKnown RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 BPIFB4P59827 614 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 WDR5P61964 334 aaKnown RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 KYAT1Q16773 422 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 ARHGAP44Q17R89 818 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 TCTN1Q2MV58 587 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 WDR44Q5JSH3 913 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 ZNF618Q5T7W0 954 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 FBXO38Q6PIJ6 1188 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 ARHGEF19Q8IW93 802 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 RHOT2Q8IXI1 618 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 RFFLQ8WZ73 363 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 CCDC127Q96BQ5 260 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 OSBPL9Q96SU4 736 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 TUT1Q9H6E5 874 aaKnown RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 C1orf112Q9NSG2 853 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 RBAKQ9NYW8 714 aaPredicted RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
CBX4-204ENST00000495122 RAB21Q9UL25 225 aa17.46■□□□□ 0.39
CBX4-204ENST00000495122 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 ACKR2O00590 384 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 ENC1O14682 589 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 OGTO15294 1046 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 CLDN3O15551 220 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 ERLIN1O75477 346 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 PRKCBP05771 671 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 SMIM10L2AP0DMW4 78 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 SMIM10L2BP0DMW5 78 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 TBXAS1P24557 533 aaPredicted RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 MCL1Q07820 350 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 ENOX2Q16206 610 aaKnown RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 FAM187BQ17R55 369 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 TMCO3Q6UWJ1 677 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 PPM1KQ8N3J5 372 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 ZSWIM2Q8NEG5 633 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 OLIG1Q8TAK6 271 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 LNX1Q8TBB1 728 aaPredicted RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 HELQQ8TDG4 1101 aa17.45■□□□□ 0.38
CBX4-204ENST00000495122 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 TARS2Q9BW92 718 aaKnown RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 PRMT7Q9NVM4 692 aaPredicted RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
CBX4-204ENST00000495122 C17orf102A2RUQ5 167 aa17.44■□□□□ 0.38
CBX4-204ENST00000495122 PALMO75781 387 aa17.44■□□□□ 0.38
CBX4-204ENST00000495122 ARHGEF15O94989 841 aa17.44■□□□□ 0.38
CBX4-204ENST00000495122 C22orf31O95567 290 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms