RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 PHACTR2O75167 634 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 TPM1P09493 284 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 LRPAP1P30533 357 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.33
BRD3-206ENST00000494743 SCNN1GP51170 649 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.33
BRD3-206ENST00000494743 JAM2P57087 298 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 MYL6P60660 151 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 POLR2FP61218 127 aaKnown RBP13.02□□□□□ -0.33
BRD3-206ENST00000494743 ZBED6P86452 979 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 GCNT1Q02742 428 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 TAF4BQ92750 862 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 NT5C1BQ96P26 610 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
BRD3-206ENST00000494743 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.02□□□□□ -0.33
BRD3-206ENST00000494743 ANK1P16157 1881 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 PPEF2O14830 753 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 THP07101 528 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 FECHP22830 423 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 ATICP31939 592 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
BRD3-206ENST00000494743 KRT9P35527 623 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
BRD3-206ENST00000494743 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
BRD3-206ENST00000494743 RBP5P82980 135 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 LRMPQ12912 555 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 GRIK3Q13003 919 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 TRPC3Q13507 836 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 IKBKEQ14164 716 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 SGSM1Q2NKQ1 1148 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 E4F1Q66K89 784 aaPredicted RBP13.01□□□□□ -0.33
BRD3-206ENST00000494743 PDXDC1Q6P996 788 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 GLB1LQ6UWU2 654 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
BRD3-206ENST00000494743 NPAS4Q8IUM7 802 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 LRRC52Q8N7C0 313 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 KAT5Q92993 513 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 TATDN2Q93075 761 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 FAXDC2Q96IV6 333 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 PANX2Q96RD6 677 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 RPS6KC1Q96S38 1066 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 NLRC4Q9NPP4 1024 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.336e-6■■■■■ 61.3
BRD3-206ENST00000494743 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 MYO6Q9UM54 1294 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
BRD3-206ENST00000494743 SCN5AQ14524 2016 aa13□□□□□ -0.33
BRD3-206ENST00000494743 LRRC53A6NM62 1247 aa13□□□□□ -0.33
BRD3-206ENST00000494743 F8VZ95 297 aa13□□□□□ -0.33
BRD3-206ENST00000494743 PIRO00625 290 aa13□□□□□ -0.33
BRD3-206ENST00000494743 BAIAP3O94812 1187 aa13□□□□□ -0.33
BRD3-206ENST00000494743 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
BRD3-206ENST00000494743 KRT19P08727 400 aa13□□□□□ -0.33
BRD3-206ENST00000494743 FGFR1P11362 822 aa13□□□□□ -0.33
BRD3-206ENST00000494743 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
BRD3-206ENST00000494743 MEA1Q16626 185 aa13□□□□□ -0.33
BRD3-206ENST00000494743 ZNF699Q32M78 642 aa13□□□□□ -0.33
BRD3-206ENST00000494743 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
BRD3-206ENST00000494743 C16orf59Q7L2K0 433 aa13□□□□□ -0.33
BRD3-206ENST00000494743 RRAGAQ7L523 313 aa13□□□□□ -0.33
BRD3-206ENST00000494743 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
BRD3-206ENST00000494743 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
BRD3-206ENST00000494743 TMEM139Q8IV31 216 aa13□□□□□ -0.33
BRD3-206ENST00000494743 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
BRD3-206ENST00000494743 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
BRD3-206ENST00000494743 PPM1KQ8N3J5 372 aa13□□□□□ -0.33
BRD3-206ENST00000494743 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
BRD3-206ENST00000494743 OR8K1Q8NGG5 319 aa13□□□□□ -0.33
BRD3-206ENST00000494743 RSPH1Q8WYR4 309 aa13□□□□□ -0.33
BRD3-206ENST00000494743 SYN2Q92777 582 aaPredicted RBP13□□□□□ -0.33
BRD3-206ENST00000494743 BADQ92934 168 aa13□□□□□ -0.33
BRD3-206ENST00000494743 FAM161BQ96MY7 647 aa13□□□□□ -0.33
BRD3-206ENST00000494743 CASD1Q96PB1 797 aa13□□□□□ -0.33
BRD3-206ENST00000494743 ARID3AQ99856 593 aa13□□□□□ -0.33
BRD3-206ENST00000494743 STK33Q9BYT3 514 aa13□□□□□ -0.33
BRD3-206ENST00000494743 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
BRD3-206ENST00000494743 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
BRD3-206ENST00000494743 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
BRD3-206ENST00000494743 UBE2TQ9NPD8 197 aaPredicted RBP13□□□□□ -0.33
BRD3-206ENST00000494743 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
BRD3-206ENST00000494743 EYSQ5T1H1 3165 aa13□□□□□ -0.33
BRD3-206ENST00000494743 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
BRD3-206ENST00000494743 HOXA2O43364 376 aa12.99□□□□□ -0.33
BRD3-206ENST00000494743 B4GALT3O60512 393 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms