RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PARP14Q460N5 1801 aa6.1□□□□□ -1.43
PTCD3-219ENST00000494323 ELP1O95163 1332 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ZNF503-AS2A6NEH8 195 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 NOTOA8MTQ0 251 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ARVCFO00192 962 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 HMMRO75330 724 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 RASGRP1O95267 797 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 NDUFB10O96000 172 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 FGBP02675 491 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 GLI1P08151 1106 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 PDGFRBP09619 1106 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 SNAP25P60880 206 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 GUCY1A3Q02108 690 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 PPIGQ13427 754 aaKnown RBP eCLIP6.09□□□□□ -1.431e-7■■□□□ 13.3
PTCD3-219ENST00000494323 MLANAQ16655 118 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 TMEM63BQ5T3F8 832 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 MPZL3Q6UWV2 235 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 CXCL17Q6UXB2 119 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ARMCX2Q7L311 632 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 OTOP2Q7RTS6 562 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 STRA8Q7Z7C7 330 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ZNF444Q8N0Y2 327 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 TMEM199Q8N511 208 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 DDX1Q92499 740 aaKnown RBP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ABHD16BQ9H3Z7 469 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 SP110Q9HB58 689 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 PDGFCQ9NRA1 345 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ZBTB40Q9NUA8 1239 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 NYAP2Q9P242 653 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ISY1Q9ULR0 285 aaKnown RBP6.09□□□□□ -1.43
PTCD3-219ENST00000494323 ZNF236Q9UL36 1845 aa6.09□□□□□ -1.44
PTCD3-219ENST00000494323 A0A0G2JMZ2 1700 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SPTBN5Q9NRC6 3674 aaKnown RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 UMODL1Q5DID0 1318 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 A0A0U1RQG5 324 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 TCRBV16S1A1N1A0A5B0 115 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 B4E1Z4 1266 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 TMEM232C9JQI7 657 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 H7BY64 318 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CTAGE5O15320 804 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 EYA4O95677 639 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CRTAMO95727 393 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 ASLP04424 464 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 MYOGP15173 224 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CST5P28325 142 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 COPB2P35606 906 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 BCL6P41182 706 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 RABGGTBP53611 331 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CCL23P55773 120 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 GJA9P57773 515 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 TNFAIP2Q03169 654 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 PAK1Q13153 545 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 ZNF124Q15973 351 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SEPT7Q16181 437 aaKnown RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SBK1Q52WX2 424 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SLFN13Q68D06 897 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 ZSCAN25Q6NSZ9 544 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CNNM4Q6P4Q7 775 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 PKN3Q6P5Z2 889 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 FAM126BQ8IXS8 530 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 Q8N1Y9 231 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 MSL3Q8N5Y2 521 aaKnown RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 LZTR1Q8N653 840 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 NUP43Q8NFH3 380 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CEP95Q96GE4 821 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 CHAMP1Q96JM3 812 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 ASB2Q96Q27 587 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 TRPV6Q9H1D0 765 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SLC28A3Q9HAS3 691 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 SLC38A10Q9HBR0 1119 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 METTL14Q9HCE5 456 aaKnown RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 INCENPQ9NQS7 918 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 MTMR4Q9NYA4 1195 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 GULP1Q9UBP9 304 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 GPR160Q9UJ42 338 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 MSRAQ9UJ68 235 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 FEM1BQ9UK73 627 aa6.08□□□□□ -1.44
PTCD3-219ENST00000494323 PRRC2BQ5JSZ5 2229 aaKnown RBP6.08□□□□□ -1.44
PTCD3-219ENST00000494323 ASTN1O14525 1302 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 GRIN2DO15399 1336 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 MROH7Q68CQ1 1323 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ZBED9Q6R2W3 1325 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 BDP1A6H8Y1 2624 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 IGKV6D-41A0A0C4DH26 115 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 A0A1W2PQJ5 194 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 M0R2C6 588 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 RFXAPO00287 272 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 ATP2A1O14983 1001 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 RNF113AO15541 343 aaKnown RBP6.07□□□□□ -1.44
PTCD3-219ENST00000494323 PSPNO60542 156 aa6.07□□□□□ -1.44
PTCD3-219ENST00000494323 TTLL1O95922 423 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms