RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 KRT39Q6A163 491 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 SPRED2Q7Z698 418 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 LUZP1Q86V48 1076 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 FBXO22Q8NEZ5 403 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 IGSF21Q96ID5 467 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 ZNF560Q96MR9 790 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 C11orf84Q9BUA3 381 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-223ENST00000494123 TMEM8AQ9HCN3 771 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 ADAM28Q9UKQ2 775 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
BRCA1-223ENST00000494123 F8W810 466 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 SOX1O00570 391 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-223ENST00000494123 FGF18O76093 207 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 C4BPAP04003 597 aaKnown RBP15.7■□□□□ 0.1
BRCA1-223ENST00000494123 PNPLA4P41247 253 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 MXI1P50539 228 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 MCCD1P59942 119 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-223ENST00000494123 TDRD10Q5VZ19 366 aaKnown RBP15.7■□□□□ 0.1
BRCA1-223ENST00000494123 SV2AQ7L0J3 742 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 MARCH5Q9NX47 278 aa15.7■□□□□ 0.1
BRCA1-223ENST00000494123 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
BRCA1-223ENST00000494123 TMEM265A0A087WTH1 108 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 ANO9A1A5B4 782 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 C5orf67F2Z3F1 127 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 TMEM189-UBE2V1I3L0A0 370 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
BRCA1-223ENST00000494123 PIRO00625 290 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 PPEF2O14830 753 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 N4BP1O75113 896 aaKnown RBP15.69■□□□□ 0.1
BRCA1-223ENST00000494123 AFPP02771 609 aaKnown RBP15.69■□□□□ 0.1
BRCA1-223ENST00000494123 PIK3CAP42336 1068 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 TAF6P49848 677 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 KCNH2Q12809 1159 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 MYO1EQ12965 1108 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 MAN2A1Q16706 1144 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 ZACNQ401N2 412 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 HABP4Q5JVS0 413 aaKnown RBP15.69■□□□□ 0.1
BRCA1-223ENST00000494123 TMEM173Q86WV6 379 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-223ENST00000494123 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 LRCH3Q96II8 777 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 ZNF576Q9H609 170 aa15.69■□□□□ 0.1
BRCA1-223ENST00000494123 SF3B1O75533 1304 aaKnown RBP eCLIP15.69■□□□□ 0.11e-9■■■■■ 99.9
BRCA1-223ENST00000494123 ITGB1P05556 798 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 FMO5P49326 533 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 MYL7Q01449 175 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 PLCB3Q01970 1234 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CETN1Q12798 172 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 GPM6BQ13491 265 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 NCOA4Q13772 614 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 SV2CQ496J9 727 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 ZNF697Q5TEC3 545 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 LRRC52Q8N7C0 313 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-223ENST00000494123 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
BRCA1-223ENST00000494123 SIX4Q9UIU6 781 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CST3P01034 146 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-223ENST00000494123 ZNF18P17022 549 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 PAX3P23760 479 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 LILRA4P59901 499 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 ELAVL2Q12926 359 aaKnown RBP15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CBWD6Q4V339 395 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CBWD3Q5JTY5 395 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CBWD5Q5RIA9 395 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 DSTYKQ6XUX3 929 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 C15orf39Q6ZRI6 1047 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 CCDC150Q8NCX0 1101 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 HPDLQ96IR7 371 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 IMPG2Q9BZV3 1241 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 ALG13Q9NP73 1137 aaKnown RBP15.68■□□□□ 0.1
BRCA1-223ENST00000494123 TAB2Q9NYJ8 693 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 STK39Q9UEW8 545 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 PLXNA4Q9HCM2 1894 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 SCN1AP35498 2009 aa15.68■□□□□ 0.1
BRCA1-223ENST00000494123 H3BNC9 293 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 VNN1O95497 513 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 HLA-DRAP01903 254 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 ATICP31939 592 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 BRCC3P46736 316 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 MYL6P60660 151 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 KRT31Q15323 416 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 VWA3BQ502W6 1294 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 DDX53Q86TM3 631 aaKnown RBP15.67■□□□□ 0.1
BRCA1-223ENST00000494123 CXorf38Q8TB03 319 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 TAS1R2Q8TE23 839 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 HSD3B7Q9H2F3 369 aa15.67■□□□□ 0.1
BRCA1-223ENST00000494123 KPNA7A9QM74 516 aa15.66■□□□□ 0.1
BRCA1-223ENST00000494123 I3L4J1 428 aa15.66■□□□□ 0.1
BRCA1-223ENST00000494123 P4HA2O15460 535 aa15.66■□□□□ 0.1
BRCA1-223ENST00000494123 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
BRCA1-223ENST00000494123 IGFBP6P24592 240 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms