RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 LRRC8AQ8IWT6 810 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CNPY4Q8N129 248 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF808Q8N4W9 903 aaPredicted RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXTL1Q92935 676 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF747Q9BV97 191 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 BOCQ9BWV1 1114 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 BTBD2Q9BX70 525 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 C12orf65Q9H3J6 166 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 POFUT1Q9H488 388 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRDM16Q9HAZ2 1276 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CGNQ9P2M7 1197 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 TCAF1Q9Y4C2 921 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PLXNB2O15031 1838 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 NPHP3Q7Z494 1330 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 STK36Q9NRP7 1315 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PLXNA1Q9UIW2 1896 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 A0A0G2JNJ9 132 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 GOLGA6L22H0YM25 854 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 COMTP21964 271 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 MTHFSP49914 203 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXOSC10Q01780 885 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 KLF10Q13118 480 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CCDC142Q17RM4 750 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 COBLL1Q53SF7 1204 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CC2D1BQ5T0F9 858 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 GORABQ5T7V8 394 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CCDC181Q5TID7 509 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 EFCAB2Q5VUJ9 269 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMEM200BQ69YZ2 307 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 TRIM68Q6AZZ1 485 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ATL3Q6DD88 541 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 TTLL5Q6EMB2 1281 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 DPY19L2P1Q6NXN4 242 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF397Q8NF99 534 aaPredicted RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ERO1AQ96HE7 468 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 MRPL4Q9BYD3 311 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ANKZF1Q9H8Y5 726 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ORC3Q9UBD5 711 aaPredicted RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 Q9UFV3 132 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 KPNA6O60684 536 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ALDH1L1O75891 902 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 AMPHP49418 695 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC6A3Q01959 620 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 USP39Q53GS9 565 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 HSP90AB4PQ58FF6 505 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 FOXR2Q6PJQ5 311 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CCAR2Q8N163 923 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 NXPE1Q8N323 547 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 C8orf58Q8NAV2 365 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CHST14Q8NCH0 376 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 OTUD7AQ8TE49 926 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MAP4K1Q92918 833 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 FAXDC2Q96IV6 333 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSPYL1Q9H0U9 437 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 METTL14Q9HCE5 456 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MRFAP1Q9Y605 127 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 NUP210LQ5VU65 1888 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 KIF26AQ9ULI4 1882 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 USP27XA6NNY8 438 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MAFGO15525 162 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ARHGAP6O43182 974 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 HIP1RO75146 1068 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MSX2P35548 267 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MRPL12P52815 198 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ALDH6A1Q02252 535 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CHAF1AQ13111 956 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 BYSLQ13895 437 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 RABL6Q3YEC7 729 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CDCA2Q69YH5 1023 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ARMCX5Q6P1M9 558 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMED8Q6PL24 325 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CRIP3Q6Q6R5 217 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 Q6ZSN1 163 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 OTOP1Q7RTM1 612 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRPF38AQ8NAV1 312 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 RTF1Q92541 710 aaKnown RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MAP3K14Q99558 947 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 SEC61A2Q9H9S3 476 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 KNSTRNQ9Y448 316 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ITIH6Q6UXX5 1313 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 THSD7BQ9C0I4 1608 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MYLKQ15746 1914 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 VWA3AA6NCI4 1184 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 C5orf60A6NFR6 353 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 NPIPB8E9PQR5 432 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 GOLIM4O00461 696 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 NEMFO60524 1076 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 PAEPP09466 180 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 PNMA6AP0CW24 399 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 TACR2P21452 398 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 GNAI1P63096 354 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 ATP8B2P98198 1209 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 IDI1Q13907 227 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 MYBPC3Q14896 1274 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 PTPROQ16827 1216 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CT47A1Q5JQC4 288 aaPredicted RBP2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 SRLQ86TD4 932 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 UNC5CLQ8IV45 518 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 RTKN2Q8IZC4 609 aa2.93□□□□□ -1.94
CDC42EP3-205ENST00000494083 CEP89Q96ST8 783 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms