RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SP4Q02446 784 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 PAK2Q13177 524 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 GRIK4Q16099 956 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 ZNF528Q3MIS6 628 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 RARS2Q5T160 578 aaKnown RBP11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 OTOP3Q7RTS5 596 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 TMC7Q7Z402 723 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 IRF2BP1Q8IU81 584 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 IFT20Q8IY31 132 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 ZNF713Q8N859 430 aaPredicted RBP11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 WHAMMQ8TF30 809 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 P3H4Q92791 437 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 MMS19Q96T76 1030 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 C7orf25Q9BPX7 421 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 TUBGCP2Q9BSJ2 902 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 NHEJ1Q9H9Q4 299 aaPredicted RBP11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 STIM2Q9P246 746 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 TRPV2Q9Y5S1 764 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 DCDC2BA2VCK2 349 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 IBSPP21815 317 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 TGM1P22735 817 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 GGCXP38435 758 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 UBA7P41226 1012 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 IRAK1P51617 712 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 GYS2P54840 703 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 MRPS9P82933 396 aaKnown RBP11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 KRT17Q04695 432 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 LRRC63Q05C16 580 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 KDM7AQ6ZMT4 941 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 DGKHQ86XP1 1220 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 MAML2Q8IZL2 1156 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 BLIDQ8IZY5 108 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 CSGALNACT2Q8N6G5 542 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 C4orf32Q8N8J7 132 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 CHP1Q99653 195 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 TBC1D17Q9HA65 648 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 RGS18Q9NS28 235 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 C1orf112Q9NSG2 853 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 NCDNQ9UBB6 729 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.57
PDLIM1-205ENST00000493949 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.58
PDLIM1-205ENST00000493949 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 MYH10P35580 1976 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 PVALEFA0A1B0GWK0 134 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 HMGB1P1B2RPK0 211 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 C9IYK1 514 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 AGPSO00116 658 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 KLRC4O43908 158 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 MGEA5O60502 916 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 KIAA0754O94854 1291 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 FSBPO95073 299 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 PDE4CQ08493 712 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 PSMD2Q13200 908 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 ZNF174Q15697 407 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 MAN2A1Q16706 1144 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 ASPRV1Q53RT3 343 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 CCDC181Q5TID7 509 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 KCNT2Q6UVM3 1135 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 SLC24A5Q71RS6 500 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 CREG2Q8IUH2 290 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 C12orf76Q8N812 135 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 MYCBPQ99417 103 aaPredicted RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 MTRQ99707 1265 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 AMNQ9BXJ7 453 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 CELF4Q9BZC1 486 aaKnown RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 ELAC1Q9H777 363 aaKnown RBP11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
PDLIM1-205ENST00000493949 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 RRN3P2A6NIE6 340 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 M0QZ92 97 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 STK25O00506 426 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 NARSO43776 548 aaKnown RBP11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 FAM189BP81408 668 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 SPDYCQ5MJ68 293 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 LRRC55Q6ZSA7 311 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 CCDC149Q6ZUS6 474 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 GPR149Q86SP6 731 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 CCDC50Q8IVM0 306 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 SPATA4Q8NEY3 305 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms