RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ADAM12O43184 909 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 IL18RAPO95256 599 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 ALADP13716 330 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 CASP1P29466 404 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 MCM4P33991 863 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 AFMP43652 599 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 AARSP49588 968 aaKnown RBP eCLIP24.56■■□□□ 1.52
SNIP1-203ENST00000493916 CUL4BQ13620 913 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 RAB33AQ14088 237 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 VARS2Q5ST30 1063 aaKnown RBP24.56■■□□□ 1.52
SNIP1-203ENST00000493916 RNF135Q8IUD6 432 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 KREMEN2Q8NCW0 462 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 FEZF2Q8TBJ5 459 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 BLZF1Q9H2G9 400 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 EPHX3Q9H6B9 360 aa24.56■■□□□ 1.52
SNIP1-203ENST00000493916 ANK1P16157 1881 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 KIAA0391O15091 583 aaKnown RBP24.55■■□□□ 1.52
SNIP1-203ENST00000493916 DCXO43602 365 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 LDHAP00338 332 aaKnown RBP24.55■■□□□ 1.52
SNIP1-203ENST00000493916 SPATA31D3P0C874 917 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 SPATA31D4Q6ZUB0 917 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 GRAMD1CQ8IYS0 662 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 TMEM130Q8N3G9 435 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 ZNF507Q8TCN5 953 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 PAGE5Q96GU1 130 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 CBWD1Q9BRT8 395 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 FAM213AQ9BRX8 229 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 C1QTNF1Q9BXJ1 281 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 PCDHB8Q9UN66 801 aa24.55■■□□□ 1.52
SNIP1-203ENST00000493916 CCDC195A0A1B0GUA6 201 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 M0QZQ0 153 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 TBC1D4O60343 1298 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 PAX3P23760 479 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 OR1D2P34982 312 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 HOXD13P35453 343 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 GUCY2FP51841 1108 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 MRPL58Q14197 206 aaKnown RBP24.54■■□□□ 1.52
SNIP1-203ENST00000493916 SLC8B1Q6J4K2 584 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 RSPO2Q6UXX9 243 aaPredicted RBP24.54■■□□□ 1.52
SNIP1-203ENST00000493916 NT5DC4Q86YG4 428 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 BRSK2Q8IWQ3 736 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 APPL2Q8NEU8 664 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 ZNF707Q96C28 371 aaPredicted RBP24.54■■□□□ 1.52
SNIP1-203ENST00000493916 SAAL1Q96ER3 474 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 CDY1Q9Y6F8 540 aa24.54■■□□□ 1.52
SNIP1-203ENST00000493916 MTCL1Q9Y4B5 1905 aaKnown RBP24.53■■□□□ 1.52
SNIP1-203ENST00000493916 H7C4K7 107 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 EXTL3O43909 919 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 RFPL2O75678 378 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 ZMYND10O75800 440 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 MYL1P05976 194 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 SYKP43405 635 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 NDUFA8P51970 172 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 ARMCX5Q6P1M9 558 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 USTQ9Y2C2 406 aa24.53■■□□□ 1.52
SNIP1-203ENST00000493916 ANO9A1A5B4 782 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 HOXA9P31269 272 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 BMT2Q1RMZ1 405 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 LIN9Q5TKA1 542 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 C9orf57Q5W0N0 161 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 EFCAB13Q8IY85 973 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 ZSWIM2Q8NEG5 633 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 SCFD1Q8WVM8 642 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 PRKD2Q9BZL6 878 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 RBAKQ9NYW8 714 aaPredicted RBP24.52■■□□□ 1.52
SNIP1-203ENST00000493916 MUTYHQ9UIF7 546 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 C2orf16Q68DN1 1984 aa24.52■■□□□ 1.52
SNIP1-203ENST00000493916 TCHHQ07283 1943 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.51■■□□□ 1.51
SNIP1-203ENST00000493916 C2CD4DB7Z1M9 353 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 PIRO00625 290 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 KLRC4O43908 158 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 HNRNPA1P09651 372 aaKnown RBP eCLIP24.51■■□□□ 1.51
SNIP1-203ENST00000493916 ZNF280DQ6N043 979 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 CCDC149Q6ZUS6 474 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 RTL10Q7L3V2 364 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 GPD1LQ8N335 351 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 FSIP1Q8NA03 581 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 SMG7Q92540 1137 aaKnown RBP24.51■■□□□ 1.51
SNIP1-203ENST00000493916 GDPD2Q9HCC8 539 aa24.51■■□□□ 1.51
SNIP1-203ENST00000493916 PPEF2O14830 753 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 C8AP07357 584 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 POU2F2P09086 479 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 SP100P23497 879 aaPredicted RBP24.5■■□□□ 1.51
SNIP1-203ENST00000493916 LILRA4P59901 499 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 SNRPFP62306 86 aaKnown RBP24.5■■□□□ 1.51
SNIP1-203ENST00000493916 TDRD5Q8NAT2 981 aaKnown RBP24.5■■□□□ 1.51
SNIP1-203ENST00000493916 PCIF1Q9H4Z3 704 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 WDR6Q9NNW5 1121 aaKnown RBP24.5■■□□□ 1.51
SNIP1-203ENST00000493916 SLC39A2Q9NP94 309 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 DPP3Q9NY33 737 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 FBXL5Q9UKA1 691 aa24.5■■□□□ 1.51
SNIP1-203ENST00000493916 GOLGA8IPA6NC78 632 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 GOLGA8JA6NMD2 632 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 TGFB1I1O43294 461 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 OAZ2O95190 189 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 WNT7BP56706 349 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 ROR1Q01973 937 aa24.49■■□□□ 1.51
SNIP1-203ENST00000493916 UVSSAQ2YD98 709 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms