RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 FBXL18Q96ME1 805 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 MTMR9Q96QG7 549 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 RPS6KC1Q96S38 1066 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 GAD1Q99259 594 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 SLC30A3Q99726 388 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 PRRX2Q99811 253 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 LLPHQ9BRT6 129 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 COLEC11Q9BWP8 271 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 EIF2AQ9BY44 585 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 POMKQ9H5K3 350 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 TUFT1Q9NNX1 390 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 XPNPEP1Q9NQW7 623 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 NOL7Q9UMY1 257 aaKnown RBP8.34□□□□□ -1.07
RBM39-238ENST00000493853 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
RBM39-238ENST00000493853 NCOR1O75376 2440 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ARHGEF35A5YM69 484 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 C2CD4DB7Z1M9 353 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 NPTXRO95502 500 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 SOD2P04179 222 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 OR52Z1P0C646 297 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 LIG1P18858 919 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ALAS2P22557 587 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 GLRA2P23416 452 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 MLH1P40692 756 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 SCNN1GP51170 649 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 MBTD1Q05BQ5 628 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ORC2Q13416 577 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 CAPSQ13938 189 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 PTPN14Q15678 1187 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 SLC27A1Q6PCB7 646 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ALYREFQ86V81 257 aaKnown RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 CDR2LQ86X02 465 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 CATSPER3Q86XQ3 398 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 UBALD2Q8IYN6 164 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 TDRD5Q8NAT2 981 aaKnown RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ASAP3Q8TDY4 903 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 BCL7CQ8WUZ0 217 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 IFT74Q96LB3 600 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 KLHL5Q96PQ7 755 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 ADPGKQ9BRR6 497 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 POLR3CQ9BUI4 534 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 TMEM60Q9H2L4 133 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 SFXN1Q9H9B4 322 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 SH2B1Q9NRF2 756 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 PRMT7Q9NVM4 692 aaPredicted RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 CDH22Q9UJ99 828 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 NOVA2Q9UNW9 492 aaKnown RBP8.33□□□□□ -1.08
RBM39-238ENST00000493853 SORCS3Q9UPU3 1222 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 KIF3AQ9Y496 699 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 HES2Q9Y543 173 aa8.33□□□□□ -1.08
RBM39-238ENST00000493853 MYO7AQ13402 2215 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 A0A1B0GUA9 196 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 N4BP3O15049 544 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 B4GALT5O43286 388 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 TADA2AO75478 443 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 CNPP09543 421 aaKnown RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 SPATA31C1P0DKV0 1188 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 AKAP5P24588 427 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 RPA1P27694 616 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 CCT6AP40227 531 aaKnown RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 GLUD2P49448 558 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 CLCN4P51793 760 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 NHLH1Q02575 133 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 TYRO3Q06418 890 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 PRPF4BQ13523 1007 aaKnown RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 PPP2R5AQ15172 486 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 USP41Q3LFD5 358 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 TTC38Q5R3I4 469 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 HAUS3Q68CZ6 603 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 CCDC149Q6ZUS6 474 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 OTOP3Q7RTS5 596 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 COLGALT2Q8IYK4 626 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 FBXO18Q8NFZ0 1043 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 DEPTORQ8TB45 409 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 SLC22A17Q8WUG5 538 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 PRIMPOLQ96LW4 560 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 RAB34Q9BZG1 259 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 MFSD1Q9H3U5 465 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 NXF3Q9H4D5 531 aaKnown RBP8.32□□□□□ -1.08
RBM39-238ENST00000493853 GPRC5CQ9NQ84 441 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 LRWD1Q9UFC0 647 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 USTQ9Y2C2 406 aa8.32□□□□□ -1.08
RBM39-238ENST00000493853 BRWD1Q9NSI6 2320 aa8.31□□□□□ -1.08
RBM39-238ENST00000493853 EVPLQ92817 2033 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms