RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 TNNC1P63316 161 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 CLDN10P78369 228 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 KCNH2Q12809 1159 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 NCOA4Q13772 614 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 NAB2Q15742 525 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 MAN2A1Q16706 1144 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 UPP1Q16831 310 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF699Q32M78 642 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 ZACNQ401N2 412 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 EPC2Q52LR7 807 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 WDR44Q5JSH3 913 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 FKBP15Q5T1M5 1219 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
VEGFA-214ENST00000493786 C9orf57Q5W0N0 161 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 KIAA1841Q6NSI8 718 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 DSTYKQ6XUX3 929 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 SV2AQ7L0J3 742 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 DHX40Q8IX18 779 aaKnown RBP8.19□□□□□ -1.1
VEGFA-214ENST00000493786 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 LRRC52Q8N7C0 313 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 HASPINQ8TF76 798 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 ARNTL2Q8WYA1 636 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 RABGGTAQ92696 567 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 IGSF21Q96ID5 467 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 MED15Q96RN5 788 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 C17orf80Q9BSJ5 609 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 RANBP2P49792 3224 aaKnown RBP8.19□□□□□ -1.1
VEGFA-214ENST00000493786 RALGAPA2Q2PPJ7 1873 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 CITO14578 2027 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 ANO9A1A5B4 782 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 P4HA2O15460 535 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 B4GALT3O60512 393 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 HUS1O60921 280 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 SERPINC1P01008 464 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 HLA-DRAP01903 254 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 URODP06132 367 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 TPM3P06753 285 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 ODC1P11926 461 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 ATICP31939 592 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 FMO5P49326 533 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 UBE3AQ05086 875 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PPP3CAQ08209 521 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 GPM6BQ13491 265 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 NCAPHQ15003 741 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 IQCB1Q15051 598 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PTPROQ16827 1216 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 SGSM1Q2NKQ1 1148 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 FILIP1LQ4L180 1135 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 VWA3BQ502W6 1294 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 HABP4Q5JVS0 413 aaKnown RBP8.18□□□□□ -1.1
VEGFA-214ENST00000493786 FUT10Q6P4F1 479 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PDXDC1Q6P996 788 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 DDX53Q86TM3 631 aaKnown RBP8.18□□□□□ -1.1
VEGFA-214ENST00000493786 METTL23Q86XA0 190 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 IRF2BP1Q8IU81 584 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 RNF214Q8ND24 703 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 FBXL13Q8NEE6 735 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 APPL2Q8NEU8 664 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 TAF4BQ92750 862 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 HPDLQ96IR7 371 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PAAF1Q9BRP4 392 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF576Q9H609 170 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 CERS4Q9HA82 394 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 TAB2Q9NYJ8 693 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 CACNG4Q9UBN1 327 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 DSEQ9UL01 958 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 LZTS1Q9Y250 596 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 SSX2IPQ9Y2D8 614 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 PTPRJQ12913 1337 aa8.18□□□□□ -1.1
VEGFA-214ENST00000493786 FNDC1Q4ZHG4 1894 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PTPRSQ13332 1948 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 KPNA7A9QM74 516 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 H3BNC9 293 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PIRO00625 290 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PMM2O15305 246 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 ARHGEF15O94989 841 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 C4BPAP04003 597 aaKnown RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 SOD2P04179 222 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 ITGB1P05556 798 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 LINC00271P0C7V0 271 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 TRIM21P19474 475 aaKnown RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 GLUD2P49448 558 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 LILRA4P59901 499 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 MYL6P60660 151 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 CREMQ03060 361 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 KRT31Q15323 416 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 USP41Q3LFD5 358 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 WDR72Q3MJ13 1102 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 CBWD6Q4V339 395 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF667Q5HYK9 610 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms