RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
VPS52-220ENST00000493674 CNTN6Q9UQ52 1028 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 NUB1Q9Y5A7 615 aa13.62□□□□□ -0.23
VPS52-220ENST00000493674 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
VPS52-220ENST00000493674 GBF1Q92538 1859 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 SOWAHDA6NJG2 315 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 NRDCO43847 1150 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 PHACTR2O75167 634 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 ITGB3P05106 788 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 SERPING1P05155 500 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 CLTBP09497 229 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 ITGA4P13612 1032 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 FERP16591 822 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 ACO1P21399 889 aaKnown RBP13.61□□□□□ -0.23
VPS52-220ENST00000493674 TBXAS1P24557 533 aaPredicted RBP13.61□□□□□ -0.23
VPS52-220ENST00000493674 ATICP31939 592 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 STAT1P42224 750 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 MYL6P60660 151 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 CUL2Q13617 745 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 TCTN1Q2MV58 587 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 ASTE1Q2TB18 679 aaPredicted RBP13.61□□□□□ -0.23
VPS52-220ENST00000493674 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 TMEM130Q8N3G9 435 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 PPM1KQ8N3J5 372 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 SPAG5Q96R06 1193 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
VPS52-220ENST00000493674 FOXN3O00409 490 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 EVI5O60447 810 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 LCA5LO95447 670 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 EOMESO95936 686 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 PLEKP08567 350 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 LRPAP1P30533 357 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 POLR2BP30876 1174 aaKnown RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 CYP2C18P33260 490 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 RFC2P35250 354 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ASPAP45381 313 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 GUCY2FP51841 1108 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 MFAP3P55082 362 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 SOX4Q06945 474 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 TRPC3Q13507 836 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 MTF1Q14872 753 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ASIC2Q16515 512 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 SLC24A5Q71RS6 500 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 CRIPAKQ8N1N5 446 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 LRRC52Q8N7C0 313 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 SEPT8Q92599 483 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 LPPQ93052 612 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 C18orf25Q96B23 403 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 ELMO3Q96BJ8 720 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 PGBD4Q96DM1 585 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ARID3AQ99856 593 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 FAM124BQ9H5Z6 455 aaPredicted RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ZNHIT6Q9NWK9 470 aaKnown RBP13.6□□□□□ -0.23
VPS52-220ENST00000493674 KLK14Q9P0G3 267 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 PARP2Q9UGN5 583 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 NENFQ9UMX5 172 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
VPS52-220ENST00000493674 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 PIRO00625 290 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 ANXA13P27216 316 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 MLH1P40692 756 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 ZNF132P52740 706 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 RBP5P82980 135 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 ZNF699Q32M78 642 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 C9orf57Q5W0N0 161 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 SCLYQ96I15 445 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 GAD1Q99259 594 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 PPP1R12CQ9BZL4 782 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 ELAC1Q9H777 363 aaKnown RBP13.59□□□□□ -0.23
VPS52-220ENST00000493674 NHEJ1Q9H9Q4 299 aaPredicted RBP13.59□□□□□ -0.23
VPS52-220ENST00000493674 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 MIOSQ9NXC5 875 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
VPS52-220ENST00000493674 BZW2Q9Y6E2 419 aaKnown RBP13.59□□□□□ -0.23
VPS52-220ENST00000493674 ESPNB1AK53 854 aa13.58□□□□□ -0.24
VPS52-220ENST00000493674 EIF3CLB5ME19 914 aaKnown RBP13.58□□□□□ -0.24
VPS52-220ENST00000493674 PPEF2O14830 753 aa13.58□□□□□ -0.24
VPS52-220ENST00000493674 GFPT2O94808 682 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms